Variant report

Variant rs1050088
Chromosome Location chr3:49570882-49570883
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49546200-49577000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr3:49547000-49572000 Weak transcription Fetal Brain Male brain
3 chr3:49548400-49577400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr3:49551400-49571400 Weak transcription Stomach Mucosa stomach
5 chr3:49551400-49572200 Weak transcription NH-A brain
6 chr3:49555800-49572200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr3:49557600-49572000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr3:49560600-49572600 Weak transcription Psoas Muscle Psoas
9 chr3:49565400-49572400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:49566600-49571400 Strong transcription Primary T cells from cord blood blood
11 chr3:49566800-49571800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr3:49566800-49572800 Genic enhancers Skeletal Muscle Male skeletal muscle
13 chr3:49567000-49571000 Strong transcription Primary B cells from peripheral blood blood
14 chr3:49567000-49571600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:49567000-49571600 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr3:49567000-49571800 Strong transcription Hela-S3 cervix
17 chr3:49567200-49571000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr3:49567200-49572200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:49567400-49571000 Strong transcription Rectal Smooth Muscle rectum
20 chr3:49567400-49571200 Strong transcription Primary B cells from cord blood blood
21 chr3:49567400-49571200 Strong transcription Dnd41 blood
22 chr3:49567400-49571600 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr3:49567400-49571800 Strong transcription Fetal Intestine Large intestine
24 chr3:49567400-49572200 Strong transcription Stomach Smooth Muscle stomach
25 chr3:49567600-49571000 Strong transcription H1 Cell Line embryonic stem cell
26 chr3:49567600-49571400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr3:49567600-49571400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr3:49567600-49571400 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr3:49567600-49572000 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr3:49567800-49571000 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr3:49567800-49571000 Strong transcription Primary monocytes fromperipheralblood blood
32 chr3:49567800-49571200 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr3:49567800-49571200 Strong transcription HSMMtube muscle
34 chr3:49567800-49571400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr3:49567800-49571400 Strong transcription Colonic Mucosa Colon
36 chr3:49567800-49571400 Strong transcription Fetal Thymus thymus
37 chr3:49567800-49571600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr3:49567800-49571600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr3:49567800-49571600 Strong transcription Adipose Nuclei Adipose
40 chr3:49567800-49571800 Strong transcription Primary T cells fromperipheralblood blood
41 chr3:49567800-49572200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr3:49567800-49574000 Strong transcription Fetal Intestine Small intestine
43 chr3:49568000-49571000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr3:49568000-49571000 Strong transcription Fetal Brain Female brain
45 chr3:49568000-49571400 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr3:49568000-49571400 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr3:49568000-49571400 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr3:49568000-49571600 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr3:49568000-49571800 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr3:49568000-49572400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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