Variant report

Variant rs885592
Chromosome Location chr3:49497883-49497884
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49482000-49498200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr3:49486600-49498600 Weak transcription Duodenum Mucosa Duodenum
3 chr3:49490600-49506600 Enhancers Fetal Muscle Leg muscle
4 chr3:49491800-49506200 Enhancers Placenta Placenta
5 chr3:49492600-49498000 Weak transcription Stomach Mucosa stomach
6 chr3:49492800-49498800 Weak transcription Right Atrium heart
7 chr3:49492800-49499200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr3:49493000-49498400 Weak transcription Esophagus oesophagus
9 chr3:49493200-49498600 Weak transcription Spleen Spleen
10 chr3:49493400-49498800 Weak transcription Adipose Nuclei Adipose
11 chr3:49494000-49498600 Weak transcription Left Ventricle heart
12 chr3:49494000-49498800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:49494000-49498800 Weak transcription Psoas Muscle Psoas
14 chr3:49494200-49498200 Weak transcription NHEK skin
15 chr3:49494200-49498600 Weak transcription NHLF lung
16 chr3:49494200-49499000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:49494200-49499000 Weak transcription Osteobl bone
18 chr3:49494600-49501800 Enhancers Fetal Muscle Trunk muscle
19 chr3:49494800-49498800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:49494800-49498800 Weak transcription Right Ventricle heart
21 chr3:49495000-49498600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr3:49495000-49498800 Weak transcription NHDF-Ad bronchial
23 chr3:49496000-49500000 Enhancers Muscle Satellite Cultured Cells --
24 chr3:49496000-49501400 Enhancers Pancreas Pancrea
25 chr3:49496200-49498000 Enhancers Fetal Stomach stomach
26 chr3:49496200-49498200 Enhancers ES-WA7 Cell Line embryonic stem cell
27 chr3:49496200-49498200 Flanking Active TSS HepG2 liver
28 chr3:49496200-49498400 Enhancers Hela-S3 cervix
29 chr3:49496200-49499000 Enhancers HUES64 Cell Line embryonic stem cell
30 chr3:49496200-49499000 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr3:49496200-49499400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
32 chr3:49496200-49500000 Enhancers H1 Cell Line embryonic stem cell
33 chr3:49496200-49500000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:49496200-49500000 Enhancers H9 Cell Line embryonic stem cell
35 chr3:49496200-49500000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:49496200-49500000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr3:49496200-49500000 Enhancers HUES48 Cell Line embryonic stem cell
38 chr3:49496200-49500000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
39 chr3:49496200-49500000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr3:49496200-49500000 Enhancers HSMM muscle
41 chr3:49496200-49500000 Enhancers HSMMtube muscle
42 chr3:49496200-49500200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr3:49496200-49501200 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr3:49496200-49501200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr3:49496200-49501200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr3:49496400-49498000 Enhancers Fetal Kidney kidney
47 chr3:49496400-49499400 Enhancers Ovary ovary
48 chr3:49496400-49499600 Enhancers Lung lung
49 chr3:49496400-49500000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:49496400-49500000 Enhancers Fetal Intestine Large intestine

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