Variant report

Variant	rs3811699
Chromosome Location	chr3:49396360-49396361
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49395198-49396481	GM18951	blood:	n/a	n/a
2	POLR2A	chr3:49395044-49396847	GM12878	blood:	n/a	n/a
3	TCF12	chr3:49395624-49396543	ECC-1	luminal epithelium:	n/a	chr3:49395946-49395956 chr3:49395765-49395775
4	POLR2A	chr3:49394446-49396988	GM12878	blood:	n/a	n/a
5	POLR2A	chr3:49395442-49396394	NB4	blood:	n/a	n/a
6	MYC	chr3:49395535-49396733	A549	lung:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
7	MXI1	chr3:49394979-49397650	SK-N-SH	brain:	n/a	chr3:49395802-49395811
8	GABPA	chr3:49395596-49396446	SK-N-SH	brain:	n/a	n/a
9	FOSL2	chr3:49394700-49396552	HepG2	liver:	n/a	n/a
10	POU2F2	chr3:49395422-49396575	GM12891	blood:	n/a	chr3:49396403-49396416 chr3:49396436-49396448
11	POLR2A	chr3:49395465-49396378	H1-hESC	embryonic stem cell:	n/a	n/a
12	POLR2A	chr3:49394871-49396500	K562	blood:	n/a	n/a
13	MAZ	chr3:49394761-49397031	IMR90	lung:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
14	HEY1	chr3:49395454-49396569	HepG2	liver:	n/a	n/a
15	EP300	chr3:49395546-49396533	ECC-1	luminal epithelium:	n/a	chr3:49395850-49395859 chr3:49395792-49395801
16	CTCF	chr3:49396092-49396370	GM12878	blood:	n/a	n/a
17	POLR2A	chr3:49394933-49396460	Hela-S3	cervix:	n/a	n/a
18	REST	chr3:49395602-49396370	HL-60	blood:	n/a	chr3:49396110-49396123
19	RAD21	chr3:49395841-49396378	Hela-S3	cervix:	n/a	chr3:49396163-49396173 chr3:49396097-49396111
20	POLR2A	chr3:49394768-49396612	GM12878	blood:	n/a	n/a
21	POLR2A	chr3:49395367-49396434	PANC-1	pancreas:	n/a	n/a
22	POLR2A	chr3:49394396-49396923	GM12892	blood:	n/a	n/a
23	POLR2A	chr3:49395560-49396623	HL-60	blood:	n/a	n/a
24	MAX	chr3:49395546-49396615	A549	lung:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
25	POLR2A	chr3:49395410-49396540	PANC-1	pancreas:	n/a	n/a
26	MAX	chr3:49395624-49396433	SK-N-SH	brain:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
27	YY1	chr3:49395687-49396384	ECC-1	luminal epithelium:	n/a	chr3:49395984-49395995
28	YY1	chr3:49395377-49396434	HepG2	liver:	n/a	chr3:49395984-49395995
29	GABPA	chr3:49395617-49396496	SK-N-SH	brain:	n/a	n/a
30	POLR2A	chr3:49395827-49396371	K562	blood:	n/a	n/a
31	GABPA	chr3:49395554-49396369	A549	lung:	n/a	n/a
32	MAZ	chr3:49395666-49396494	GM12878	blood:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
33	YY1	chr3:49395520-49396496	GM12878	blood:	n/a	chr3:49395984-49395995
34	MAX	chr3:49395595-49396498	H1-hESC	embryonic stem cell:	n/a	chr3:49395801-49395814 chr3:49395798-49395817 chr3:49395803-49395812 chr3:49395803-49395812 chr3:49396311-49396320
35	SMC3	chr3:49395682-49396566	GM12878	blood:	n/a	chr3:49395768-49395778
36	TAF1	chr3:49395342-49396461	H1-hESC	embryonic stem cell:	n/a	n/a
37	MXI1	chr3:49394902-49396654	IMR90	lung:	n/a	chr3:49395802-49395811
38	POLR2A	chr3:49395619-49396466	K562	blood:	n/a	n/a
39	POLR2A	chr3:49395426-49396668	HCT-116	colon:	n/a	n/a
40	ELF1	chr3:49395656-49396647	HCT-116	colon:	n/a	chr3:49395792-49395801 chr3:49395983-49395992
41	CHD2	chr3:49395727-49396421	GM12878	blood:	n/a	n/a
42	FOS	chr3:49395022-49397450	HUVEC	blood vessel:	n/a	chr3:49397250-49397261
43	POLR2A	chr3:49394471-49396497	U87	brain:	n/a	n/a
44	EBF1	chr3:49395741-49396388	GM12878	blood:	n/a	n/a
45	POLR2A	chr3:49395010-49396461	GM12878	blood:	n/a	n/a
46	POLR2A	chr3:49395250-49396467	H1-hESC	embryonic stem cell:	n/a	n/a
47	ELF1	chr3:49395674-49396527	SK-N-SH	brain:	n/a	chr3:49395792-49395801 chr3:49395983-49395992
48	POLR2A	chr3:49394421-49396491	U87	brain:	n/a	n/a
49	GABPA	chr3:49395691-49396423	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr3:49394945-49396460	GM18505	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:49394592..49396828-chr3:49447365..49450223,2	K562	blood:
2	chr2:10183042..10184037-chr3:49396115..49396938,2	Hela-S3	cervix:
3	chr3:49376495..49379313-chr3:49396208..49398833,3	K562	blood:
4	chr11:62420315..62421118-chr3:49395431..49396391,2	NB4	blood:

Variant related genes	Relation type
GPX1	TF binding region
ENSG00000172059	Chromatin interaction
ENSG00000145022	Chromatin interaction
ENSG00000067560	Chromatin interaction
ENSG00000114316	Chromatin interaction
ENSG00000185085	Chromatin interaction

Extended variants
information (count: 99 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:99)

rs_ID	r²[population]
rs1050088	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1050450	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10865955	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs11130192	1.00[JPT][hapmap]
rs11130199	0.93[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs11706370	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11711485	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.88[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11711536	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11712569	0.80[AMR][1000 genomes]
rs11713474	0.81[AMR][1000 genomes]
rs11715915	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11716974	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11719996	0.83[AMR][1000 genomes]
rs11720264	1.00[JPT][hapmap]
rs11922013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12330269	0.83[AMR][1000 genomes]
rs12489092	1.00[JPT][hapmap]
rs13078949	0.85[GIH][hapmap]
rs13079082	0.82[AMR][1000 genomes]
rs13079643	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13086611	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13087851	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13090388	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1464566	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464567	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1464568	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs1568661	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs17080528	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17595772	0.94[ASN][1000 genomes]
rs17650792	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1800668	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1801143	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes]
rs1987628	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2117939	0.90[ASN][1000 genomes]
rs2878298	0.94[ASN][1000 genomes]
rs34196454	0.80[AMR][1000 genomes]
rs34293138	0.83[AMR][1000 genomes]
rs34363169	0.83[AMR][1000 genomes]
rs34588335	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35115732	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35169793	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35261698	0.85[AMR][1000 genomes]
rs35701831	0.86[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3811697	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes]
rs3870338	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3924462	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3926569	0.82[AMR][1000 genomes]
rs4625	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes]
rs4855839	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855842	1.00[JPT][hapmap]
rs4855859	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855864	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855873	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs4855877	1.00[JPT][hapmap]
rs4955412	0.94[ASN][1000 genomes]
rs4955438	0.82[ASN][1000 genomes]
rs62259939	0.94[ASN][1000 genomes]
rs62259942	0.83[ASN][1000 genomes]
rs6446264	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6446272	1.00[ASW][hapmap];0.94[CEU][hapmap];0.86[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6446277	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs67216675	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs67485053	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6766131	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs6766581	0.83[AMR][1000 genomes]
rs6779524	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6784820	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs6792911	0.82[ASN][1000 genomes]
rs6793308	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6797664	0.83[AMR][1000 genomes]
rs6797765	0.94[ASN][1000 genomes]
rs6809216	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6997	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs71324962	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7373849	0.87[ASN][1000 genomes]
rs7621003	0.94[ASN][1000 genomes]
rs7622302	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes]
rs7623659	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7631908	0.88[ASN][1000 genomes]
rs7633271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.82[AMR][1000 genomes]
rs7637999	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs7643586	0.82[ASN][1000 genomes]
rs7646366	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.94[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7648841	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs885592	0.93[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs9814873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9818590	0.85[AMR][1000 genomes]
rs9821311	0.85[AMR][1000 genomes]
rs9827021	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs9837027	0.81[AMR][1000 genomes]
rs9841110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9850072	0.83[AMR][1000 genomes]
rs9853683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.83[YRI][hapmap];0.83[AMR][1000 genomes]
rs9858280	0.81[AMR][1000 genomes]
rs9858418	0.82[AMR][1000 genomes]
rs9859556	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9871380	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9878943	1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs3811699	FAM212A	cis	Muscle Skeletal	GTEx
rs3811699	CISH	cis	parietal	SCAN
rs3811699	IHPK2	Cis_1M	lymphoblastoid	RTeQTL
rs3811699	RNF123	cis	cerebellum	SCAN
rs3811699	ZNF589	cis	parietal	SCAN
rs3811699	IP6K2	cis	cerebellum	SCAN
rs3811699	PARP3	cis	parietal	SCAN
rs3811699	NICN1	cis	cerebellum	SCAN
rs3811699	RNF123	cis	parietal	SCAN
rs3811699	AMT	cis	parietal	SCAN
rs3811699	KDM5B	trans	lymphoblastoid	seeQTL
rs3811699	RBM6	cis	cerebellum	SCAN
rs3811699	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs3811699	GPX1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49390800-49396600	Weak transcription	K562	blood
2	chr3:49393600-49396800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr3:49393600-49397000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr3:49394200-49396400	Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr3:49394200-49396400	Active TSS	Duodenum Smooth Muscle	Duodenum
6	chr3:49394200-49396600	Active TSS	ES-I3 Cell Line	embryonic stem cell
7	chr3:49394600-49396400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr3:49394600-49396400	Active TSS	H9 Cell Line	embryonic stem cell
9	chr3:49394600-49396400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
10	chr3:49394600-49396400	Active TSS	Brain Angular Gyrus	brain
11	chr3:49394600-49396600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr3:49394600-49396600	Active TSS	iPS-15b Cell Line	embryonic stem cell
13	chr3:49394600-49396600	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr3:49394800-49396400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
15	chr3:49394800-49396400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr3:49394800-49396400	Active TSS	Aorta	Aorta
17	chr3:49394800-49396400	Active TSS	Sigmoid Colon	Sigmoid Colon
18	chr3:49394800-49396600	Active TSS	HUES48 Cell Line	embryonic stem cell
19	chr3:49395200-49396400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr3:49395200-49396600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
21	chr3:49395400-49396600	Enhancers	Fetal Brain Male	brain
22	chr3:49395800-49396400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr3:49395800-49396400	Transcr. at gene 5' and 3'	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr3:49395800-49396400	Flanking Active TSS	Primary T cells fromperipheralblood	blood
25	chr3:49395800-49396400	Flanking Active TSS	Primary hematopoietic stem cells	blood
26	chr3:49395800-49396400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
27	chr3:49395800-49396400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
28	chr3:49395800-49396400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
29	chr3:49395800-49396400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr3:49395800-49396400	Transcr. at gene 5' and 3'	Fetal Stomach	stomach
31	chr3:49395800-49396400	Weak transcription	Small Intestine	intestine
32	chr3:49395800-49396400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
33	chr3:49395800-49396600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr3:49395800-49396600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr3:49395800-49396600	Transcr. at gene 5' and 3'	Fetal Adrenal Gland	Adrenal Gland
36	chr3:49395800-49396800	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr3:49395800-49396800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
38	chr3:49396000-49396400	Transcr. at gene 5' and 3'	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr3:49396000-49396400	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr3:49396000-49396400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr3:49396000-49396400	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
42	chr3:49396000-49396400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
43	chr3:49396000-49396400	Flanking Active TSS	Brain Cingulate Gyrus	brain
44	chr3:49396000-49396400	Flanking Active TSS	Brain Hippocampus Middle	brain
45	chr3:49396000-49396400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
46	chr3:49396000-49396400	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
47	chr3:49396000-49396400	Flanking Active TSS	Brain Substantia Nigra	brain
48	chr3:49396000-49396400	Flanking Active TSS	Duodenum Mucosa	Duodenum
49	chr3:49396000-49396400	Flanking Active TSS	Esophagus	oesophagus
50	chr3:49396000-49396400	Flanking Active TSS	Fetal Lung	lung

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