Variant report

Variant	rs1131095
Chromosome Location	chr3:49714225-49714226
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:13)
CpG islands
(count:61)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:13 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49714102-49714678	HepG2	liver:	n/a	n/a
2	POLR2A	chr3:49713884-49714754	GM12892	blood:	n/a	n/a
3	POLR2A	chr3:49709792-49716426	HepG2	liver:	n/a	n/a
4	POLR2A	chr3:49713619-49715212	GM12878	blood:	n/a	n/a
5	POLR2A	chr3:49713852-49714891	HepG2	liver:	n/a	n/a
6	POLR2A	chr3:49713953-49714231	H1-neurons	neurons:	n/a	n/a
7	POLR2A	chr3:49714134-49714543	MCF-7	breast:	n/a	n/a
8	POLR2A	chr3:49713587-49715186	HepG2	liver:	n/a	n/a
9	POLR2A	chr3:49714115-49714303	GM12878	blood:	n/a	n/a
10	POLR2A	chr3:49714081-49714343	H1-hESC	embryonic stem cell:	n/a	n/a
11	POLR2A	chr3:49714117-49714496	MCF-7	breast:	n/a	n/a
12	POLR2A	chr3:49714027-49714329	GM12878	blood:	n/a	n/a
13	POLR2A	chr3:49714049-49714365	ECC-1	luminal epithelium:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:49714199-49714249	MCF-7	breast:	n/a
2	chr3:49714199-49714249	SK-N-SH	brain:	n/a
3	chr3:49714199-49714249	HCPEpiC	choroid plexus:	n/a
4	chr3:49714199-49714249	HCT-116	colon:	n/a
5	chr3:49714199-49714249	BJ	skin:	n/a
6	chr3:49714199-49714249	NB4	blood:	n/a
7	chr3:49714199-49714249	GM12878	blood:	n/a
8	chr3:49714199-49714249	ovcar-3	ovarian:	n/a
9	chr3:49714199-49714249	SKMC	muscle:	n/a
10	chr3:49714199-49714249	SAEC	small airway:	n/a
11	chr3:49714199-49714249	Jurkat	blood:	n/a
12	chr3:49714199-49714249	K562	blood:	n/a
13	chr3:49714199-49714249	RPTEC	kidney:	n/a
14	chr3:49714199-49714249	HUVEC	blood vessel:	n/a
15	chr3:49714199-49714249	AG04450	lung:	fetal
16	chr3:49714199-49714249	Hela-S3	cervix:	n/a
17	chr3:49714199-49714249	PrEC	prostate:	n/a
18	chr3:49714199-49714249	GM19239	blood:	n/a
19	chr3:49714199-49714249	Caco-2	colon:	n/a
20	chr3:49714199-49714249	U87	brain:	n/a
21	chr3:49714199-49714249	IMR90	lung:	fetal
22	chr3:49714199-49714249	HRE	kidney:	n/a
23	chr3:49714199-49714249	LNCaP	prostate:	n/a
24	chr3:49714199-49714249	PANC-1	pancreas:	n/a
25	chr3:49714199-49714249	PFSK-1	brain:	n/a
26	chr3:49714199-49714249	HEK293	kidney:	embryo
27	chr3:49714199-49714249	HRPEpiC	eye:	n/a
28	chr3:49714199-49714249	HMEC	breast:	n/a
29	chr3:49714199-49714249	GM06990	blood:	n/a
30	chr3:49714199-49714249	CMK	blood:	n/a
31	chr3:49714199-49714249	GM12891	blood:	n/a
32	chr3:49714199-49714249	AG09319	gingival:	n/a
33	chr3:49714199-49714249	AG10803	skin:	n/a
34	chr3:49714199-49714249	NH-A	brain:	n/a
35	chr3:49714199-49714249	NT2-D1	testis:	n/a
36	chr3:49714199-49714249	Hepatocyte	liver:	n/a
37	chr3:49714199-49714249	H1-hESC	embryonic stem cell:	embryo
38	chr3:49714199-49714249	SK-N-SH_RA	brain:	n/a
39	chr3:49714199-49714249	HEEpiC	esophagus:	n/a
40	chr3:49714199-49714249	HNPCEpiC	eye:	n/a
41	chr3:49714199-49714249	ProgFib	skin:	n/a
42	chr3:49714199-49714249	T-47D	breast:	n/a
43	chr3:49714199-49714249	SK-N-MC	brain:	n/a
44	chr3:49714199-49714249	BE2_C	brain:	n/a
45	chr3:49714199-49714249	A549	lung:	n/a
46	chr3:49714199-49714249	HepG2	liver:	n/a
47	chr3:49714199-49714249	ECC-1	luminal epithelium:	n/a
48	chr3:49714199-49714249	HAEpiC	amniotic membrane:	n/a
49	chr3:49714199-49714249	GM12892	blood:	n/a
50	chr3:49714199-49714249	AG04449	skin:	fetal

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49506444..49509653-chr3:49710909..49714606,3	K562	blood:
2	chr3:49711727..49717769-chr3:49722772..49726950,7	K562	blood:
3	chr3:49710552..49715225-chr3:49718907..49727364,14	MCF-7	breast:
4	chr3:49708866..49715375-chr3:49724746..49730407,6	K562	blood:

No data

Variant related genes	Relation type
APEH	TF binding region
APEH	CpG island
ENSG00000259970	Chromatin interaction
ENSG00000173531	Chromatin interaction
ENSG00000164068	Chromatin interaction
ENSG00000164062	Chromatin interaction
ENSG00000173402	Chromatin interaction

Extended variants
information (count: 73 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:69)

rs_ID	r²[population]
rs1050088	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs1060962	0.92[CHD][hapmap];0.88[GIH][hapmap]
rs11130199	0.86[JPT][hapmap]
rs11130212	0.92[ASN][1000 genomes]
rs11130213	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11709525	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11710037	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11718165	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11720264	0.86[JPT][hapmap]
rs11720597	0.82[AMR][1000 genomes]
rs11917431	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11919311	0.92[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11921590	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12489092	0.86[JPT][hapmap]
rs13064576	0.82[AMR][1000 genomes]
rs13085791	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13316695	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1352890	0.86[ASN][1000 genomes]
rs1568661	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs1801143	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.81[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs1873625	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1873626	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2131104	0.92[CHD][hapmap];0.88[GIH][hapmap]
rs2131109	0.92[CHD][hapmap];0.88[GIH][hapmap]
rs2172252	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2329020	0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2960548	0.92[ASN][1000 genomes]
rs3197999	0.85[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34762726	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35007338	0.87[ASN][1000 genomes]
rs35404120	0.87[ASN][1000 genomes]
rs35701831	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs3811697	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.89[MEX][hapmap];0.90[TSI][hapmap]
rs3870338	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs3924462	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs4283605	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4625	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs4855847	0.87[ASN][1000 genomes]
rs4855852	0.92[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4855859	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs4855864	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs4855881	0.92[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4855883	0.81[ASN][1000 genomes]
rs4855884	1.00[CHB][hapmap];0.92[CHD][hapmap];0.88[GIH][hapmap]
rs6766131	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs6770670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6803222	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7614725	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7622302	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs7633271	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs7637999	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs9811982	1.00[CEU][hapmap]
rs9812791	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9822268	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.93[LWK][hapmap];0.88[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9823546	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9824092	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9827021	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs9827708	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];0.90[YRI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9833611	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9836291	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9837027	1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs9837341	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9837520	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9858213	0.85[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];0.82[CHD][hapmap];0.84[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs9858280	1.00[CEU][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.90[TSI][hapmap]
rs9858542	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9862080	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9875617	0.85[ASW][hapmap];1.00[CEU][hapmap];0.85[CHD][hapmap];0.97[GIH][hapmap];0.86[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.90[TSI][hapmap];0.82[AMR][1000 genomes]
rs9882740	0.85[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508217	chr3:49615446-49769896	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	esv1796352	chr3:49687101-49949959	Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	esv1825898	chr3:49688948-49764849	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	esv1808511	chr3:49689880-49744825	Active TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs1131095	MYL3	cis	parietal	SCAN
rs1131095	RNF123	cis	parietal	SCAN
rs1131095	CISH	cis	lymphoblastoid	seeQTL
rs1131095	CCDC71	cis	cerebellum	SCAN
rs1131095	PARP3	cis	parietal	SCAN
rs1131095	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs1131095	FAM212A	cis	Muscle Skeletal	GTEx
rs1131095	ZNF589	cis	parietal	SCAN
rs1131095	IP6K2	cis	cerebellum	SCAN
rs1131095	GPX1	cis	parietal	SCAN
rs1131095	IHPK2	Cis_1M	lymphoblastoid	RTeQTL
rs1131095	CELSR3	cis	cerebellum	SCAN
rs1131095	RNF123	cis	cerebellum	SCAN
rs1131095	RBM6	cis	cerebellum	SCAN

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49711600-49714600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr3:49712200-49723800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:49712600-49714400	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr3:49712600-49714600	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr3:49712600-49716800	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr3:49712800-49714600	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr3:49712800-49715800	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
8	chr3:49712800-49722200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr3:49712800-49722200	Strong transcription	Fetal Stomach	stomach
10	chr3:49712800-49723600	Weak transcription	Right Atrium	heart
11	chr3:49712800-49726200	Weak transcription	Small Intestine	intestine
12	chr3:49713000-49714400	Genic enhancers	Skeletal Muscle Female	skeletal muscle
13	chr3:49713000-49714600	Genic enhancers	Liver	Liver
14	chr3:49713000-49714800	Genic enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr3:49713000-49714800	Genic enhancers	Right Ventricle	heart
16	chr3:49713000-49715000	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
17	chr3:49713000-49715400	Weak transcription	HSMM	muscle
18	chr3:49713000-49715600	Genic enhancers	Primary T cells fromperipheralblood	blood
19	chr3:49713000-49718400	Strong transcription	ES-I3 Cell Line	embryonic stem cell
20	chr3:49713000-49721200	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr3:49713000-49721400	Strong transcription	NHEK	skin
22	chr3:49713000-49721600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
23	chr3:49713000-49721600	Strong transcription	Brain Substantia Nigra	brain
24	chr3:49713000-49721600	Strong transcription	NHLF	lung
25	chr3:49713000-49722000	Strong transcription	HUES48 Cell Line	embryonic stem cell
26	chr3:49713000-49722000	Strong transcription	Stomach Smooth Muscle	stomach
27	chr3:49713000-49722200	Strong transcription	Duodenum Smooth Muscle	Duodenum
28	chr3:49713000-49722400	Strong transcription	H9 Cell Line	embryonic stem cell
29	chr3:49713000-49722400	Strong transcription	Cortex derived primary cultured neurospheres	brain
30	chr3:49713000-49722600	Strong transcription	HUES6 Cell Line	embryonic stem cell
31	chr3:49713000-49722800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr3:49713000-49722800	Strong transcription	Thymus	Thymus
33	chr3:49713000-49723200	Weak transcription	Stomach Mucosa	stomach
34	chr3:49713000-49723400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr3:49713000-49723800	Weak transcription	Fetal Heart	heart
36	chr3:49713200-49714400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
37	chr3:49713200-49714400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
38	chr3:49713200-49714600	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
39	chr3:49713200-49716000	Strong transcription	K562	blood
40	chr3:49713200-49720600	Strong transcription	Osteobl	bone
41	chr3:49713200-49721400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr3:49713200-49721400	Strong transcription	Colon Smooth Muscle	Colon
43	chr3:49713200-49721400	Strong transcription	Left Ventricle	heart
44	chr3:49713200-49721600	Strong transcription	Rectal Smooth Muscle	rectum
45	chr3:49713200-49721800	Strong transcription	H1 Cell Line	embryonic stem cell
46	chr3:49713200-49721800	Strong transcription	Primary monocytes fromperipheralblood	blood
47	chr3:49713200-49722000	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr3:49713200-49722000	Strong transcription	Brain Inferior Temporal Lobe	brain
49	chr3:49713200-49722000	Strong transcription	Rectal Mucosa Donor 29	rectum
50	chr3:49713200-49722200	Strong transcription	HUES64 Cell Line	embryonic stem cell

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