The 2.0 version of rSNPBase

Variant report

Variant rs11140248
Chromosome Location chr9:86397019-86397020
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:86348400-86415400 Weak transcription Fetal Heart heart
2 chr9:86350000-86431600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr9:86350800-86407000 Weak transcription Primary B cells from cord blood blood
4 chr9:86352000-86411800 Weak transcription Ovary ovary
5 chr9:86352600-86398200 Weak transcription Fetal Brain Female brain
6 chr9:86353000-86432000 Weak transcription Lung lung
7 chr9:86357800-86398800 Weak transcription Pancreas Pancrea
8 chr9:86363800-86412400 Weak transcription HepG2 liver
9 chr9:86363800-86431200 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr9:86364800-86412000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr9:86364800-86413400 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr9:86367000-86413600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr9:86367200-86397600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr9:86367400-86411800 Weak transcription Brain Substantia Nigra brain
15 chr9:86367600-86412000 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr9:86367800-86397800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr9:86368000-86398200 Weak transcription Left Ventricle heart
18 chr9:86368000-86398800 Weak transcription Aorta Aorta
19 chr9:86373200-86411800 Weak transcription Stomach Smooth Muscle stomach
20 chr9:86376600-86397800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr9:86376600-86397800 Weak transcription Primary hematopoietic stem cells blood
22 chr9:86377000-86412600 Weak transcription Brain Anterior Caudate brain
23 chr9:86377200-86397800 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr9:86377200-86432000 Weak transcription Gastric stomach
25 chr9:86378200-86398200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr9:86378400-86418400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr9:86379600-86398800 Weak transcription Thymus Thymus
28 chr9:86380000-86398000 Weak transcription Adipose Nuclei Adipose
29 chr9:86380200-86431600 Weak transcription Fetal Kidney kidney
30 chr9:86381400-86411800 Weak transcription Brain Hippocampus Middle brain
31 chr9:86383600-86425800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr9:86384800-86397800 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr9:86385000-86397200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr9:86385400-86409200 Weak transcription Primary T cells from cord blood blood
35 chr9:86386400-86398800 Weak transcription Fetal Thymus thymus
36 chr9:86388000-86398800 Weak transcription Fetal Muscle Leg muscle
37 chr9:86388200-86398200 Weak transcription Fetal Intestine Large intestine
38 chr9:86388200-86411400 Weak transcription Fetal Muscle Trunk muscle
39 chr9:86389000-86398800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr9:86389000-86431600 Weak transcription Rectal Smooth Muscle rectum
41 chr9:86389200-86400200 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr9:86390200-86398800 Weak transcription Right Ventricle heart
43 chr9:86391800-86398800 Weak transcription Duodenum Mucosa Duodenum
44 chr9:86391800-86411800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr9:86392000-86431600 Weak transcription Psoas Muscle Psoas
46 chr9:86392000-86431800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr9:86393400-86412000 Weak transcription Brain Angular Gyrus brain
48 chr9:86393600-86397800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr9:86393600-86412400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr9:86393800-86398800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015