The 2.0 version of rSNPBase

Variant report

Variant rs11161807
Chromosome Location chr1:86841225-86841226
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86808600-86842800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:86813800-86842600 Weak transcription Fetal Heart heart
3 chr1:86815200-86860200 Weak transcription Fetal Brain Male brain
4 chr1:86816000-86842400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:86817200-86843800 Weak transcription Small Intestine intestine
6 chr1:86817600-86843000 Weak transcription Brain Cingulate Gyrus brain
7 chr1:86817800-86842400 Weak transcription Rectal Smooth Muscle rectum
8 chr1:86818000-86842600 Weak transcription Fetal Intestine Small intestine
9 chr1:86818000-86843200 Weak transcription Pancreas Pancrea
10 chr1:86818000-86851600 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:86819800-86842200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:86819800-86842600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:86819800-86843000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:86819800-86843000 Weak transcription Fetal Muscle Trunk muscle
15 chr1:86820200-86842600 Weak transcription Brain Germinal Matrix brain
16 chr1:86820200-86843400 Weak transcription Left Ventricle heart
17 chr1:86820200-86854400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:86820200-86854800 Weak transcription HSMMtube muscle
19 chr1:86820400-86842400 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:86820400-86842800 Weak transcription Fetal Muscle Leg muscle
21 chr1:86820400-86842800 Weak transcription Placenta Placenta
22 chr1:86820400-86845400 Weak transcription Hela-S3 cervix
23 chr1:86820400-86846200 Weak transcription NHLF lung
24 chr1:86820400-86846400 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:86820400-86847000 Weak transcription Liver Liver
26 chr1:86820400-86848000 Weak transcription Stomach Smooth Muscle stomach
27 chr1:86820400-86860200 Weak transcription NHEK skin
28 chr1:86820600-86842800 Weak transcription Brain Substantia Nigra brain
29 chr1:86820600-86843000 Weak transcription Duodenum Mucosa Duodenum
30 chr1:86820600-86848000 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:86820800-86842000 Weak transcription Colon Smooth Muscle Colon
32 chr1:86822400-86846200 Weak transcription Gastric stomach
33 chr1:86823000-86843000 Weak transcription Ovary ovary
34 chr1:86824000-86841400 Weak transcription Fetal Intestine Large intestine
35 chr1:86824000-86843000 Weak transcription Brain Hippocampus Middle brain
36 chr1:86824000-86848200 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:86825600-86842800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:86826400-86842800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr1:86828800-86842800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:86828800-86842800 Weak transcription Fetal Stomach stomach
41 chr1:86829200-86842800 Weak transcription Fetal Brain Female brain
42 chr1:86836400-86842800 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:86836600-86860800 Weak transcription Aorta Aorta
44 chr1:86837200-86842800 Weak transcription H9 Cell Line embryonic stem cell
45 chr1:86838200-86842000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:86838200-86842800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:86838200-86843600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:86838200-86845800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:86838400-86841600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:86838400-86842000 Strong transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015