The 2.0 version of rSNPBase

Variant report

Variant rs11165098
Chromosome Location chr1:94687675-94687676
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94668800-94699000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr1:94673800-94698600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:94673800-94701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:94674000-94697000 Weak transcription HSMMtube muscle
5 chr1:94676400-94691600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:94680800-94688200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr1:94681200-94689000 Genic enhancers HUVEC blood vessel
8 chr1:94683000-94690000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:94683800-94688000 Strong transcription HMEC breast
10 chr1:94683800-94688400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:94684200-94690000 Strong transcription NHEK skin
12 chr1:94684400-94688000 Genic enhancers NHDF-Ad bronchial
13 chr1:94684800-94692800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:94684800-94698600 Weak transcription Left Ventricle heart
15 chr1:94685000-94691400 Weak transcription Fetal Heart heart
16 chr1:94685000-94691800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:94685000-94692000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:94685000-94701000 Weak transcription Right Ventricle heart
19 chr1:94685200-94687800 Weak transcription Fetal Kidney kidney
20 chr1:94685200-94690400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:94685200-94691800 Weak transcription Adipose Nuclei Adipose
22 chr1:94685200-94696800 Weak transcription HepG2 liver
23 chr1:94685200-94700600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:94685200-94700800 Weak transcription NHLF lung
25 chr1:94685200-94701000 Weak transcription Psoas Muscle Psoas
26 chr1:94685400-94689200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:94685400-94690800 Weak transcription HSMM muscle
28 chr1:94685400-94697400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:94685600-94696000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:94685800-94687800 Weak transcription Liver Liver
31 chr1:94685800-94693800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:94685800-94699400 Weak transcription Fetal Muscle Leg muscle
33 chr1:94686000-94691600 Weak transcription NH-A brain
34 chr1:94686600-94688800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:94687000-94690400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:94687400-94688200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:94687600-94687800 Genic enhancers Osteobl bone
38 chr1:94687600-94688000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:94687600-94688000 Enhancers A549 lung

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Last update: Aug 31, 2015