The 2.0 version of rSNPBase

Variant report

Variant rs11172160
Chromosome Location chr12:57711214-57711215
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57677600-57713000 Weak transcription Stomach Mucosa stomach
2 chr12:57678000-57713000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr12:57691000-57736200 Weak transcription Right Atrium heart
4 chr12:57693600-57743800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr12:57693800-57713000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:57694000-57713200 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr12:57694000-57713200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr12:57694000-57780000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:57694200-57734000 Weak transcription Rectal Smooth Muscle rectum
10 chr12:57694400-57732400 Weak transcription Ovary ovary
11 chr12:57694400-57735000 Weak transcription Psoas Muscle Psoas
12 chr12:57695200-57794600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr12:57696800-57715200 Weak transcription Gastric stomach
14 chr12:57697000-57726000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr12:57697000-57735400 Weak transcription Right Ventricle heart
16 chr12:57697200-57734000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr12:57697200-57745000 Weak transcription Lung lung
18 chr12:57697400-57713000 Weak transcription Fetal Lung lung
19 chr12:57697400-57721400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr12:57699800-57762400 Weak transcription Left Ventricle heart
21 chr12:57700000-57712600 Weak transcription Fetal Muscle Leg muscle
22 chr12:57700000-57717800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr12:57700000-57719800 Weak transcription Fetal Kidney kidney
24 chr12:57700000-57720000 Weak transcription Fetal Intestine Large intestine
25 chr12:57700000-57733800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr12:57700000-57736000 Weak transcription Fetal Brain Male brain
27 chr12:57700400-57721600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr12:57703200-57713000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr12:57703400-57733800 Weak transcription Primary hematopoietic stem cells blood
30 chr12:57703400-57734600 Weak transcription Stomach Smooth Muscle stomach
31 chr12:57703400-57742000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr12:57703600-57719000 Weak transcription Primary B cells from peripheral blood blood
33 chr12:57703800-57713400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr12:57703800-57720200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr12:57703800-57723400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:57703800-57725000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:57703800-57726600 Weak transcription Colon Smooth Muscle Colon
38 chr12:57704000-57713000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:57704000-57713200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:57704000-57720600 Weak transcription Placenta Placenta
41 chr12:57704000-57726400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr12:57704200-57713200 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr12:57704200-57718400 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr12:57704200-57718800 Weak transcription Primary T cells from cord blood blood
45 chr12:57704200-57719000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr12:57704200-57720000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr12:57704200-57721200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr12:57704200-57721600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr12:57704200-57725400 Weak transcription Thymus Thymus
50 chr12:57704200-57728200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015