Variant report

Variant	rs11182918
Chromosome Location	chr12:45609276-45609277
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZBTB7A	chr12:45608957-45610960	ECC-1	luminal epithelium:	n/a	chr12:45609279-45609288 chr12:45609386-45609393
2	MAX	chr12:45609104-45610895	MCF-7	breast:	n/a	chr12:45609719-45609728 chr12:45609717-45609728 chr12:45609720-45609727
3	CTCF	chr12:45609166-45609401	MCF-7	breast:	n/a	n/a
4	POLR2A	chr12:45608943-45610124	SK-N-SH	brain:	n/a	n/a
5	SIN3A	chr12:45609159-45610966	H1-hESC	embryonic stem cell:	n/a	chr12:45610312-45610325 chr12:45610027-45610040 chr12:45610739-45610747
6	POLR2A	chr12:45608992-45610855	GM18505	blood:	n/a	n/a
7	CTCF	chr12:45609200-45609350	SK-N-SH_RA	brain:	n/a	n/a
8	TCF12	chr12:45609135-45609923	A549	lung:	n/a	n/a
9	EP300	chr12:45609181-45610023	T-47D	breast:	n/a	chr12:45609855-45609864 chr12:45609798-45609807 chr12:45609246-45609259
10	CTCF	chr12:45609200-45609350	HA-sp	spinal cord:	n/a	n/a
11	MEF2A	chr12:45608963-45609536	GM12878	blood:	n/a	chr12:45609060-45609074
12	CTCF	chr12:45609160-45609310	GM12866	blood:	n/a	n/a
13	MAZ	chr12:45609082-45611312	IMR90	lung:	n/a	chr12:45609719-45609728 chr12:45609717-45609728 chr12:45609720-45609727
14	POLR2A	chr12:45609089-45610785	A549	lung:	n/a	n/a
15	POLR2A	chr12:45609055-45610151	GM12891	blood:	n/a	n/a
16	STAT3	chr12:45608946-45609393	MCF10A-Er-Src	breast:	n/a	chr12:45609040-45609054 chr12:45609037-45609057 chr12:45609043-45609052 chr12:45609100-45609111 chr12:45609041-45609052 chr12:45609042-45609051
17	BCLAF1	chr12:45609028-45610665	GM12878	blood:	n/a	chr12:45609851-45609860 chr12:45610247-45610255
18	TRIM28	chr12:45609057-45609981	K562	blood:	n/a	n/a
19	MAX	chr12:45609110-45610817	K562	blood:	n/a	chr12:45609719-45609728 chr12:45609717-45609728 chr12:45609720-45609727
20	RAD21	chr12:45609103-45609546	SK-N-SH_RA	brain:	n/a	chr12:45609157-45609164
21	CTCF	chr12:45609103-45609438	HepG2	liver:	n/a	n/a
22	RELA	chr12:45609104-45610927	GM15510	blood:	n/a	chr12:45610758-45610767 chr12:45610758-45610767
23	TEAD4	chr12:45609003-45610232	ECC-1	luminal epithelium:	n/a	n/a
24	CTCF	chr12:45609240-45609390	Hela-S3	cervix:	n/a	n/a
25	NRF1	chr12:45608889-45610373	SK-N-SH	brain:	n/a	chr12:45609268-45609277 chr12:45609752-45609761 chr12:45609864-45609878
26	SIN3A	chr12:45609123-45610001	GM12878	blood:	n/a	n/a
27	CTCF	chr12:45609186-45609347	LNCaP	prostate:	n/a	n/a
28	RAD21	chr12:45609047-45609522	HepG2	liver:	n/a	chr12:45609157-45609164
29	ELF1	chr12:45609024-45610692	GM12878	blood:	n/a	chr12:45609881-45609893 chr12:45609854-45609866 chr12:45610364-45610376
30	ATF2	chr12:45609086-45609807	GM12878	blood:	n/a	n/a
31	CTCF	chr12:45609145-45609537	K562	blood:	n/a	n/a
32	SMARCB1	chr12:45609106-45611105	Hela-S3	cervix:	n/a	n/a
33	ZC3H11A	chr12:45609144-45609890	K562	blood:	n/a	n/a
34	PML	chr12:45609048-45609989	K562	blood:	n/a	n/a
35	CTCF	chr12:45609220-45609370	BE2_C	brain:	n/a	n/a
36	ZNF217	chr12:45609270-45609818	MCF-7	breast:	n/a	n/a
37	MAX	chr12:45609127-45610864	GM12878	blood:	n/a	chr12:45609719-45609728 chr12:45609717-45609728 chr12:45609720-45609727
38	FOXM1	chr12:45609026-45610011	GM12878	blood:	n/a	n/a
39	TBL1XR1	chr12:45608669-45609834	K562	blood:	n/a	n/a
40	FOXA1	chr12:45609111-45609459	T-47D	breast:	n/a	n/a
41	CTCF	chr12:45609090-45609358	A549	lung:	n/a	n/a
42	CHD2	chr12:45609097-45610531	GM12878	blood:	n/a	chr12:45610369-45610379
43	CTCF	chr12:45609220-45609370	GM12874	blood:	n/a	n/a
44	CTCF	chr12:45609160-45609310	WERI-Rb-1	eye:	n/a	n/a
45	KAP1	chr12:45609133-45609966	HEK293	kidney:	n/a	n/a
46	MXI1	chr12:45608368-45612550	SK-N-SH	brain:	n/a	n/a
47	CTCF	chr12:45609140-45609290	HUVEC	blood vessel:	n/a	n/a
48	MYC	chr12:45609112-45610007	K562	blood:	n/a	chr12:45609719-45609728 chr12:45609717-45609728 chr12:45609720-45609727
49	CTCF	chr12:45609220-45609370	K562	blood:	n/a	n/a
50	BCLAF1	chr12:45608935-45610353	GM12878	blood:	n/a	chr12:45609851-45609860 chr12:45610247-45610255

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:45609265-45609315	PrEC	prostate:	n/a
2	chr12:45609265-45609315	NH-A	brain:	n/a
3	chr12:45609265-45609315	RPTEC	kidney:	n/a
4	chr12:45609265-45609315	SKMC	muscle:	n/a
5	chr12:45609265-45609315	AG04449	skin:	fetal
6	chr12:45609265-45609315	Hepatocyte	liver:	n/a
7	chr12:45609227-45609277	NHDF-neo	bronchial:	n/a
8	chr12:45609227-45609277	ECC-1	luminal epithelium:	n/a
9	chr12:45609265-45609315	GM12878	blood:	n/a
10	chr12:45609227-45609277	PANC-1	pancreas:	n/a
11	chr12:45609227-45609277	PrEC	prostate:	n/a
12	chr12:45609227-45609277	BJ	skin:	n/a
13	chr12:45609227-45609277	SAEC	small airway:	n/a
14	chr12:45609265-45609315	SAEC	small airway:	n/a
15	chr12:45609265-45609315	SK-N-MC	brain:	n/a
16	chr12:45609265-45609315	HUVEC	blood vessel:	n/a
17	chr12:45609265-45609315	HIPEpiC	eye:	n/a
18	chr12:45609265-45609315	ProgFib	skin:	n/a
19	chr12:45609227-45609277	MCF10A-Er-Src	breast:	n/a
20	chr12:45609265-45609315	HCT-116	colon:	n/a
21	chr12:45609227-45609277	HPAEpiC	pulmonary alveolar:	n/a
22	chr12:45609227-45609277	Hela-S3	cervix:	n/a
23	chr12:45609265-45609315	HepG2	liver:	n/a
24	chr12:45609227-45609277	K562	blood:	n/a
25	chr12:45609265-45609315	Hela-S3	cervix:	n/a
26	chr12:45609265-45609315	NHBE	bronchial:	n/a
27	chr12:45609265-45609315	HCF	heart:	n/a
28	chr12:45609227-45609277	HCPEpiC	choroid plexus:	n/a
29	chr12:45609265-45609315	CMK	blood:	n/a
30	chr12:45609227-45609277	HMEC	breast:	n/a
31	chr12:45609227-45609277	SK-N-SH	brain:	n/a
32	chr12:45609227-45609277	HCT-116	colon:	n/a
33	chr12:45609227-45609277	GM06990	blood:	n/a
34	chr12:45609227-45609277	Caco-2	colon:	n/a
35	chr12:45609265-45609315	ECC-1	luminal epithelium:	n/a
36	chr12:45609227-45609277	CMK	blood:	n/a
37	chr12:45609227-45609277	AG09319	gingival:	n/a
38	chr12:45609265-45609315	GM12892	blood:	n/a
39	chr12:45609227-45609277	LNCaP	prostate:	n/a
40	chr12:45609265-45609315	K562	blood:	n/a
41	chr12:45609227-45609277	HCM	heart:	n/a
42	chr12:45609265-45609315	ovcar-3	ovarian:	n/a
43	chr12:45609227-45609277	GM12891	blood:	n/a
44	chr12:45609227-45609277	GM12878	blood:	n/a
45	chr12:45609265-45609315	HNPCEpiC	eye:	n/a
46	chr12:45609265-45609315	A549	lung:	n/a
47	chr12:45609227-45609277	HEEpiC	esophagus:	n/a
48	chr12:45609265-45609315	GM06990	blood:	n/a
49	chr12:45609227-45609277	AG10803	skin:	n/a
50	chr12:45609265-45609315	HCPEpiC	choroid plexus:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:45608238..45611148-chr12:46119877..46124655,5	K562	blood:
2	chr12:45593253..45599943-chr12:45607385..45612735,9	MCF-7	breast:
3	chr12:45609128..45611204-chr12:46122660..46124378,3	MCF-7	breast:
4	chr12:45607714..45610119-chr12:46385742..46387348,2	K562	blood:

Variant related genes	Relation type
ANO6	TF binding region
ANO6	CpG island
ENSG00000273015	Chromatin interaction
ENSG00000139218	Chromatin interaction
ENSG00000257738	Chromatin interaction
ENSG00000189079	Chromatin interaction

Extended variants
information (count: 105 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:104)

rs_ID	r²[population]
rs1015626	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs10437984	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10459293	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs10459294	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs10492284	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs10492285	0.82[ASW][hapmap]
rs10748412	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10785556	0.89[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10785557	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10785566	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs10880755	0.87[GIH][hapmap];0.86[JPT][hapmap];0.90[MEX][hapmap];0.86[AMR][1000 genomes]
rs10880756	0.86[AMR][1000 genomes]
rs10880760	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10880761	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10880762	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10880763	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10880764	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10880771	0.81[AMR][1000 genomes]
rs11182903	0.81[EUR][1000 genomes]
rs11182904	0.89[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11182905	0.90[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11182908	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11182912	0.89[EUR][1000 genomes]
rs11182913	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182916	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs11182917	0.91[EUR][1000 genomes]
rs11182919	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs11182921	0.91[EUR][1000 genomes]
rs11182922	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11182923	0.91[EUR][1000 genomes]
rs11182927	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs11182931	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs11182935	0.91[EUR][1000 genomes]
rs11182936	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11182938	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11182939	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11182940	0.91[EUR][1000 genomes]
rs11182941	0.91[EUR][1000 genomes]
rs11182942	0.81[EUR][1000 genomes]
rs11182943	0.91[EUR][1000 genomes]
rs11182944	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11182946	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11182947	0.89[EUR][1000 genomes]
rs11182949	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11561532	0.91[EUR][1000 genomes]
rs11610233	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11611509	0.81[EUR][1000 genomes]
rs11612203	0.91[EUR][1000 genomes]
rs11612233	0.89[CEU][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs11615850	0.91[EUR][1000 genomes]
rs12226944	0.82[EUR][1000 genomes]
rs12227678	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs12228733	0.81[EUR][1000 genomes]
rs12230322	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12231753	1.00[ASW][hapmap];0.90[CEU][hapmap];0.95[CHB][hapmap];0.92[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12299174	0.81[EUR][1000 genomes]
rs12320168	1.00[CEU][hapmap];0.87[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.89[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12320437	0.89[EUR][1000 genomes]
rs12322087	0.81[EUR][1000 genomes]
rs12814332	0.89[EUR][1000 genomes]
rs12815115	0.91[EUR][1000 genomes]
rs12815577	0.91[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12822746	0.91[EUR][1000 genomes]
rs12828052	0.85[EUR][1000 genomes]
rs1399721	0.81[AMR][1000 genomes]
rs17095551	0.91[EUR][1000 genomes]
rs17095557	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs1913692	0.86[JPT][hapmap]
rs2052602	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2052603	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2408184	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.89[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2408185	0.89[CEU][hapmap];0.91[EUR][1000 genomes]
rs34024171	0.91[EUR][1000 genomes]
rs35054776	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs35588430	0.81[EUR][1000 genomes]
rs35660715	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3759077	0.91[EUR][1000 genomes]
rs3759080	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3759081	0.91[EUR][1000 genomes]
rs3759082	0.89[CEU][hapmap];0.87[EUR][1000 genomes]
rs3782131	0.89[CEU][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs4768085	0.91[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4768601	0.80[JPT][hapmap]
rs57797434	0.91[EUR][1000 genomes]
rs58444879	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs61923810	0.91[EUR][1000 genomes]
rs61923825	0.91[EUR][1000 genomes]
rs61923830	0.91[EUR][1000 genomes]
rs7135988	0.81[AMR][1000 genomes]
rs7136368	0.81[AMR][1000 genomes]
rs7138247	0.86[JPT][hapmap]
rs7138983	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs728590	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs7304481	0.91[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7307262	0.86[JPT][hapmap]
rs7309615	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs7956033	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7963038	1.00[CEU][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7963057	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7964635	0.83[ASN][1000 genomes]
rs7965430	0.86[JPT][hapmap]
rs7971900	0.83[ASW][hapmap];0.86[JPT][hapmap];0.90[MEX][hapmap];0.80[AMR][1000 genomes]
rs929903	0.81[AMR][1000 genomes]
rs9739519	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050923	chr12:45581310-45808289	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45608000-45611800	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr12:45608200-45611800	Active TSS	HMEC	breast
3	chr12:45608200-45612400	Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr12:45608400-45609800	Flanking Active TSS	Primary B cells from cord blood	blood
5	chr12:45608400-45610000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr12:45608400-45610800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr12:45608400-45611400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr12:45608400-45611400	Active TSS	Muscle Satellite Cultured Cells	--
9	chr12:45608400-45611400	Active TSS	Adipose Nuclei	Adipose
10	chr12:45608400-45611600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr12:45608400-45611600	Active TSS	K562	blood
12	chr12:45608400-45611800	Active TSS	iPS-20b Cell Line	embryonic stem cell
13	chr12:45608400-45611800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr12:45608400-45611800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr12:45608400-45611800	Active TSS	NHDF-Ad	bronchial
16	chr12:45608400-45612200	Active TSS	Duodenum Smooth Muscle	Duodenum
17	chr12:45608400-45612400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr12:45608400-45613400	Active TSS	Stomach Smooth Muscle	stomach
19	chr12:45608600-45609400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
20	chr12:45608600-45609600	Active TSS	Right Atrium	heart
21	chr12:45608600-45610000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr12:45608600-45610200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr12:45608600-45610600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
24	chr12:45608600-45610800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
25	chr12:45608600-45611000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
26	chr12:45608600-45611400	Active TSS	Brain Hippocampus Middle	brain
27	chr12:45608600-45611400	Active TSS	Fetal Heart	heart
28	chr12:45608600-45611400	Active TSS	Fetal Kidney	kidney
29	chr12:45608600-45611400	Active TSS	Thymus	Thymus
30	chr12:45608600-45611600	Active TSS	H9 Cell Line	embryonic stem cell
31	chr12:45608600-45611600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr12:45608600-45611600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr12:45608600-45611600	Active TSS	HUES64 Cell Line	embryonic stem cell
34	chr12:45608600-45611600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr12:45608600-45611600	Active TSS	Fetal Lung	lung
36	chr12:45608600-45611600	Active TSS	Fetal Muscle Trunk	muscle
37	chr12:45608600-45611600	Active TSS	Fetal Stomach	stomach
38	chr12:45608600-45611800	Active TSS	H1 Cell Line	embryonic stem cell
39	chr12:45608600-45611800	Active TSS	Placenta	Placenta
40	chr12:45608600-45611800	Active TSS	Left Ventricle	heart
41	chr12:45608600-45611800	Active TSS	Rectal Mucosa Donor 29	rectum
42	chr12:45608600-45611800	Active TSS	HSMM	muscle
43	chr12:45608600-45611800	Active TSS	HSMMtube	muscle
44	chr12:45608600-45612000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr12:45608600-45612000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr12:45608600-45612000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr12:45608600-45612000	Active TSS	Fetal Intestine Small	intestine
48	chr12:45608600-45612000	Active TSS	Fetal Muscle Leg	muscle
49	chr12:45608600-45612200	Active TSS	ES-I3 Cell Line	embryonic stem cell
50	chr12:45608600-45612200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links