Variant report

Variant	rs929903
Chromosome Location	chr12:45560467-45560468
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10437984	0.84[AMR][1000 genomes]
rs10785557	0.81[AMR][1000 genomes]
rs10880755	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10880756	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10880757	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs10880758	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs10880761	0.86[JPT][hapmap]
rs10880762	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs10880764	0.85[JPT][hapmap];0.82[YRI][hapmap];0.84[AMR][1000 genomes]
rs11182898	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs11182899	0.90[EUR][1000 genomes]
rs11182905	0.90[CEU][hapmap];0.86[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11182908	0.87[EUR][1000 genomes]
rs11182918	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs11182938	0.81[AMR][1000 genomes]
rs11182939	0.84[AMR][1000 genomes]
rs11182949	0.86[JPT][hapmap]
rs12230322	0.86[JPT][hapmap];0.81[AMR][1000 genomes]
rs12231753	0.90[CEU][hapmap];0.86[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12320168	0.86[JPT][hapmap]
rs12815577	0.86[JPT][hapmap]
rs1896024	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1903934	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2052603	0.86[JPT][hapmap]
rs2408184	0.86[JPT][hapmap]
rs35660715	0.81[AMR][1000 genomes]
rs3759080	0.81[AMR][1000 genomes]
rs4768085	0.86[JPT][hapmap]
rs61923804	0.90[EUR][1000 genomes]
rs7135988	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7304481	0.86[JPT][hapmap]
rs7954282	0.89[CEU][hapmap];0.90[EUR][1000 genomes]
rs7956033	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7963038	0.81[AMR][1000 genomes]
rs7963057	0.84[AMR][1000 genomes]
rs7971900	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45558600-45560800	Enhancers	Fetal Muscle Leg	muscle
2	chr12:45559000-45560800	Enhancers	Psoas Muscle	Psoas
3	chr12:45559200-45560800	Enhancers	HSMMtube	muscle
4	chr12:45559600-45560600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr12:45559600-45561600	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr12:45559800-45560600	Weak transcription	Aorta	Aorta
7	chr12:45559800-45561200	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr12:45559800-45562800	Weak transcription	Left Ventricle	heart
9	chr12:45559800-45569400	Weak transcription	Right Ventricle	heart
10	chr12:45560000-45561200	Weak transcription	Right Atrium	heart
11	chr12:45560000-45569000	Weak transcription	Adipose Nuclei	Adipose
12	chr12:45560200-45569200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr12:45560200-45570400	Weak transcription	Duodenum Smooth Muscle	Duodenum

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