The 2.0 version of rSNPBase

Variant report

Variant rs11188214
Chromosome Location chr12:29479560-29479561
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:29427200-29527400 Weak transcription Small Intestine intestine
2 chr12:29452800-29494200 Weak transcription Lung lung
3 chr12:29453800-29480000 Weak transcription Gastric stomach
4 chr12:29455200-29489400 Weak transcription Primary B cells from cord blood blood
5 chr12:29459400-29493000 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr12:29461200-29486200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr12:29462600-29533000 Weak transcription Aorta Aorta
8 chr12:29465000-29494200 Weak transcription Colonic Mucosa Colon
9 chr12:29466200-29488800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr12:29468600-29491000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr12:29470000-29486400 Weak transcription Psoas Muscle Psoas
12 chr12:29470000-29495600 Weak transcription Stomach Smooth Muscle stomach
13 chr12:29470000-29500000 Weak transcription K562 blood
14 chr12:29470800-29485800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr12:29470800-29492800 Weak transcription Primary B cells from peripheral blood blood
16 chr12:29470800-29492800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr12:29470800-29493400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr12:29470800-29493800 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:29470800-29496000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:29470800-29508400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr12:29470800-29532800 Weak transcription Right Ventricle heart
22 chr12:29471200-29491400 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr12:29471200-29493000 Weak transcription Brain Substantia Nigra brain
24 chr12:29471200-29494400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr12:29471400-29495800 Weak transcription Brain Anterior Caudate brain
26 chr12:29471600-29492600 Weak transcription Duodenum Mucosa Duodenum
27 chr12:29472200-29493800 Weak transcription Left Ventricle heart
28 chr12:29473800-29485400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:29473800-29493000 Weak transcription HMEC breast
30 chr12:29473800-29522600 Weak transcription NHEK skin
31 chr12:29474000-29493400 Weak transcription HUVEC blood vessel
32 chr12:29474200-29485200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr12:29474200-29489600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr12:29474200-29490600 Weak transcription NH-A brain
35 chr12:29474200-29493000 Weak transcription Osteobl bone
36 chr12:29474200-29494200 Weak transcription NHDF-Ad bronchial
37 chr12:29474400-29485600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr12:29474400-29490600 Weak transcription Liver Liver
39 chr12:29474800-29493800 Weak transcription Fetal Intestine Large intestine
40 chr12:29475600-29489600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr12:29475800-29485000 Weak transcription Adipose Nuclei Adipose
42 chr12:29475800-29491200 Weak transcription Primary T cells fromperipheralblood blood
43 chr12:29475800-29493200 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr12:29475800-29493400 Weak transcription Colon Smooth Muscle Colon
45 chr12:29476000-29485000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr12:29476000-29485200 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr12:29476000-29492200 Weak transcription Placenta Placenta
48 chr12:29476000-29496000 Weak transcription Muscle Satellite Cultured Cells --
49 chr12:29476000-29502600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr12:29476200-29485600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015