The 2.0 version of rSNPBase

Variant report

Variant rs595478
Chromosome Location chr10:96974518-96974519
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:96944200-96990400 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr10:96949800-96980600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr10:96952800-96974600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr10:96956200-96979000 Weak transcription Pancreas Pancrea
5 chr10:96956200-96990400 Weak transcription Aorta Aorta
6 chr10:96960200-96988800 Weak transcription Placenta Amnion Placenta Amnion
7 chr10:96961200-96974600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr10:96961800-96975200 Weak transcription Primary B cells from cord blood blood
9 chr10:96961800-96989400 Weak transcription Primary T cells from cord blood blood
10 chr10:96962000-96990000 Weak transcription Fetal Intestine Small intestine
11 chr10:96965000-96988000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr10:96965400-96983000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr10:96965400-96989400 Weak transcription Fetal Intestine Large intestine
14 chr10:96969200-96979400 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr10:96969200-96979600 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr10:96969200-96990200 Weak transcription Left Ventricle heart
17 chr10:96969400-96974800 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr10:96969400-96977400 Weak transcription H9 Cell Line embryonic stem cell
19 chr10:96969400-96980200 Weak transcription H1 Cell Line embryonic stem cell
20 chr10:96969400-96980200 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr10:96969400-96980400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr10:96969400-96981600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr10:96969400-96984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr10:96969400-96990400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr10:96970200-96992400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr10:96971800-96989400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr10:96972000-96977400 Weak transcription NHLF lung
28 chr10:96972200-96988000 Weak transcription Adipose Nuclei Adipose
29 chr10:96972400-96974600 Weak transcription HSMM muscle
30 chr10:96972400-96974600 Weak transcription NHDF-Ad bronchial
31 chr10:96972400-96977400 Weak transcription HSMMtube muscle
32 chr10:96972400-96987400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr10:96972400-96987800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr10:96972600-96975800 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr10:96972600-96977400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr10:96972600-96989600 Weak transcription Fetal Thymus thymus
37 chr10:96972800-96975600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr10:96973600-96975400 Enhancers Osteobl bone
39 chr10:96973600-96981000 Weak transcription Gastric stomach
40 chr10:96973800-96975400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr10:96974000-96975200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr10:96974000-96975400 Enhancers Muscle Satellite Cultured Cells --
43 chr10:96974000-96975600 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr10:96974200-96974800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr10:96974200-96975000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr10:96974200-96975200 Flanking Active TSS A549 lung
47 chr10:96974200-96975200 Enhancers NH-A brain
48 chr10:96974200-96975400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr10:96974200-96975400 Enhancers Primary hematopoietic stem cells blood
50 chr10:96974200-96975600 Enhancers HMEC breast

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Last update: Aug 31, 2015