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Variant report

Variant rs12354433
Chromosome Location chr10:96943844-96943845
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:96942000-96948200 Weak transcription HepG2 liver
2 chr10:96942400-96944000 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr10:96942400-96944200 Active TSS Pancreatic Islets Pancreatic Islet
4 chr10:96942600-96944000 Active TSS HUES48 Cell Line embryonic stem cell
5 chr10:96942600-96944000 Active TSS Liver Liver
6 chr10:96942800-96944000 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr10:96942800-96944000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr10:96942800-96944000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr10:96942800-96944000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr10:96942800-96944000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr10:96942800-96944000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr10:96942800-96944000 Active TSS Aorta Aorta
13 chr10:96942800-96944000 Active TSS Brain Angular Gyrus brain
14 chr10:96942800-96944000 Active TSS Brain Anterior Caudate brain
15 chr10:96942800-96944000 Active TSS Fetal Brain Female brain
16 chr10:96942800-96944000 Active TSS Fetal Intestine Large intestine
17 chr10:96942800-96944000 Active TSS Rectal Smooth Muscle rectum
18 chr10:96942800-96944000 Active TSS Right Atrium heart
19 chr10:96942800-96944000 Flanking Active TSS HUVEC blood vessel
20 chr10:96942800-96944200 Active TSS Primary T cells from cord blood blood
21 chr10:96942800-96944200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr10:96942800-96944200 Active TSS Rectal Mucosa Donor 29 rectum
23 chr10:96942800-96944200 Active TSS A549 lung
24 chr10:96943000-96944000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr10:96943000-96944000 Active TSS H9 Cell Line embryonic stem cell
26 chr10:96943000-96944000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr10:96943000-96944000 Active TSS HUES64 Cell Line embryonic stem cell
28 chr10:96943000-96944000 Bivalent/Poised TSS Primary T helper cells PMA-I stimulated --
29 chr10:96943000-96944000 Bivalent/Poised TSS Primary T cells effector/memory enriched fromperipheralblood blood
30 chr10:96943000-96944000 Active TSS Primary T killer naive cells fromperipheralblood blood
31 chr10:96943000-96944000 Active TSS Primary T killer memory cells from peripheral blood blood
32 chr10:96943000-96944000 Bivalent/Poised TSS Brain Germinal Matrix brain
33 chr10:96943000-96944000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
34 chr10:96943000-96944000 Active TSS Brain Substantia Nigra brain
35 chr10:96943000-96944000 Active TSS Colon Smooth Muscle Colon
36 chr10:96943000-96944000 Active TSS Gastric stomach
37 chr10:96943000-96944000 Active TSS Ovary ovary
38 chr10:96943000-96944000 Active TSS Psoas Muscle Psoas
39 chr10:96943000-96944000 Active TSS Right Ventricle heart
40 chr10:96943000-96944000 Active TSS Sigmoid Colon Sigmoid Colon
41 chr10:96943000-96944000 Active TSS Hela-S3 cervix
42 chr10:96943000-96944000 Active TSS HSMM muscle
43 chr10:96943000-96944000 Active TSS Osteobl bone
44 chr10:96943000-96944200 Active TSS Colonic Mucosa Colon
45 chr10:96943000-96944600 Active TSS Lung lung
46 chr10:96943200-96944000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr10:96943200-96944000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr10:96943200-96944000 Enhancers Primary monocytes fromperipheralblood blood
49 chr10:96943200-96944000 Active TSS Primary T helper naive cells from peripheral blood blood
50 chr10:96943200-96944000 Active TSS Brain Hippocampus Middle brain

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Last update: Aug 31, 2015