The 2.0 version of rSNPBase

Variant report

Variant rs35999600
Chromosome Location chr10:96984473-96984474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:96944200-96990400 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr10:96956200-96990400 Weak transcription Aorta Aorta
3 chr10:96960200-96988800 Weak transcription Placenta Amnion Placenta Amnion
4 chr10:96961800-96989400 Weak transcription Primary T cells from cord blood blood
5 chr10:96962000-96990000 Weak transcription Fetal Intestine Small intestine
6 chr10:96965000-96988000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr10:96965400-96989400 Weak transcription Fetal Intestine Large intestine
8 chr10:96969200-96990200 Weak transcription Left Ventricle heart
9 chr10:96969400-96984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr10:96969400-96990400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr10:96970200-96992400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr10:96971800-96989400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr10:96972200-96988000 Weak transcription Adipose Nuclei Adipose
14 chr10:96972400-96987400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr10:96972400-96987800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr10:96972600-96989600 Weak transcription Fetal Thymus thymus
17 chr10:96975400-96990200 Weak transcription Primary hematopoietic stem cells blood
18 chr10:96975600-96990000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr10:96976000-96990000 Weak transcription Primary B cells from cord blood blood
20 chr10:96976400-96989600 Weak transcription GM12878-XiMat blood
21 chr10:96976800-96987400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr10:96978400-96988000 Weak transcription H9 Cell Line embryonic stem cell
23 chr10:96978600-96987600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr10:96980200-96988000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr10:96980200-96989400 Weak transcription Fetal Heart heart
26 chr10:96981000-96987800 Weak transcription HMEC breast
27 chr10:96981400-96986800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr10:96981400-96987800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr10:96981400-96988000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr10:96981600-96987400 Weak transcription NHDF-Ad bronchial
31 chr10:96981600-96988000 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr10:96981600-96988400 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr10:96981800-96988000 Weak transcription H1 Cell Line embryonic stem cell
34 chr10:96981800-96988000 Weak transcription HSMM muscle
35 chr10:96981800-96988000 Weak transcription NHLF lung
36 chr10:96981800-96989200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr10:96982000-96984600 Weak transcription A549 lung
38 chr10:96982400-96990200 Weak transcription Rectal Smooth Muscle rectum
39 chr10:96983000-96985200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr10:96983400-96985200 Strong transcription ES-I3 Cell Line embryonic stem cell
41 chr10:96984200-96985800 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr10:96984200-96987800 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr10:96984200-96988200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015