The 2.0 version of rSNPBase

Variant report

Variant rs11188227
Chromosome Location chr10:96977482-96977483
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:96944200-96990400 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr10:96949800-96980600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr10:96956200-96979000 Weak transcription Pancreas Pancrea
4 chr10:96956200-96990400 Weak transcription Aorta Aorta
5 chr10:96960200-96988800 Weak transcription Placenta Amnion Placenta Amnion
6 chr10:96961800-96989400 Weak transcription Primary T cells from cord blood blood
7 chr10:96962000-96990000 Weak transcription Fetal Intestine Small intestine
8 chr10:96965000-96988000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr10:96965400-96983000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr10:96965400-96989400 Weak transcription Fetal Intestine Large intestine
11 chr10:96969200-96979400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr10:96969200-96979600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr10:96969200-96990200 Weak transcription Left Ventricle heart
14 chr10:96969400-96980200 Weak transcription H1 Cell Line embryonic stem cell
15 chr10:96969400-96980200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr10:96969400-96980400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr10:96969400-96981600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr10:96969400-96984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr10:96969400-96990400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr10:96970200-96992400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr10:96971800-96989400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr10:96972200-96988000 Weak transcription Adipose Nuclei Adipose
23 chr10:96972400-96987400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr10:96972400-96987800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr10:96972600-96989600 Weak transcription Fetal Thymus thymus
26 chr10:96973600-96981000 Weak transcription Gastric stomach
27 chr10:96974800-96981000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr10:96975400-96980600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr10:96975400-96990200 Weak transcription Primary hematopoietic stem cells blood
30 chr10:96975600-96979000 Strong transcription ES-I3 Cell Line embryonic stem cell
31 chr10:96975600-96990000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr10:96975800-96981000 Weak transcription Duodenum Mucosa Duodenum
33 chr10:96976000-96990000 Weak transcription Primary B cells from cord blood blood
34 chr10:96976200-96981200 Weak transcription Primary B cells from peripheral blood blood
35 chr10:96976400-96978400 Enhancers Muscle Satellite Cultured Cells --
36 chr10:96976400-96978600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr10:96976400-96989600 Weak transcription GM12878-XiMat blood
38 chr10:96976600-96981000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr10:96976800-96979600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr10:96976800-96980200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr10:96976800-96987400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr10:96977000-96978600 Enhancers HMEC breast
43 chr10:96977200-96977600 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr10:96977200-96978200 Enhancers HSMM muscle
45 chr10:96977200-96978600 Enhancers Osteobl bone
46 chr10:96977400-96977600 Enhancers H9 Cell Line embryonic stem cell
47 chr10:96977400-96978000 Enhancers NHEK skin
48 chr10:96977400-96978200 Enhancers NHLF lung
49 chr10:96977400-96978400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr10:96977400-96978400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015