Variant report

Variant	rs11197222
Chromosome Location	chr10:117219926-117219927
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 112 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:112)

rs_ID	r²[population]
rs1071575	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10736240	0.80[ASN][1000 genomes]
rs10787557	0.83[ASN][1000 genomes]
rs10787558	0.80[ASN][1000 genomes]
rs10787572	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10885677	0.80[ASN][1000 genomes]
rs10885680	0.80[ASN][1000 genomes]
rs10885681	0.80[ASN][1000 genomes]
rs10885682	0.80[ASN][1000 genomes]
rs10885687	0.80[ASN][1000 genomes]
rs10885700	0.82[ASN][1000 genomes]
rs10885702	0.83[ASN][1000 genomes]
rs10885705	0.93[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10885706	0.93[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs10885712	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885713	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885714	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885715	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10885716	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885717	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885718	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10885719	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197149	0.80[ASN][1000 genomes]
rs11197150	0.80[ASN][1000 genomes]
rs11197159	0.80[ASN][1000 genomes]
rs11197160	0.80[ASN][1000 genomes]
rs11197168	0.80[ASN][1000 genomes]
rs11197180	0.93[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11197203	0.93[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs11525277	0.80[ASN][1000 genomes]
rs1158406	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1170884	0.85[ASN][1000 genomes]
rs12357053	0.80[ASN][1000 genomes]
rs1389648	0.83[ASN][1000 genomes]
rs1565832	0.83[ASN][1000 genomes]
rs2172669	0.80[ASN][1000 genomes]
rs2420075	0.80[ASN][1000 genomes]
rs2420077	0.80[ASN][1000 genomes]
rs2453212	0.83[ASN][1000 genomes]
rs2484863	0.83[ASN][1000 genomes]
rs2485965	0.83[ASN][1000 genomes]
rs2485969	0.81[ASN][1000 genomes]
rs2485970	0.83[ASN][1000 genomes]
rs2492980	0.80[ASN][1000 genomes]
rs2901047	0.93[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2901048	0.93[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs34938864	0.80[ASN][1000 genomes]
rs5004584	0.93[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs581518	0.83[ASN][1000 genomes]
rs583767	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs585908	0.83[ASN][1000 genomes]
rs586786	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs589508	0.83[ASN][1000 genomes]
rs590713	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs595299	0.83[ASN][1000 genomes]
rs595487	0.83[ASN][1000 genomes]
rs595931	0.83[ASN][1000 genomes]
rs595976	0.83[ASN][1000 genomes]
rs596404	0.83[ASN][1000 genomes]
rs596776	0.83[ASN][1000 genomes]
rs600259	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs606204	0.83[ASN][1000 genomes]
rs608759	0.83[ASN][1000 genomes]
rs611389	0.83[ASN][1000 genomes]
rs611492	0.83[ASN][1000 genomes]
rs614722	0.83[ASN][1000 genomes]
rs615178	0.83[ASN][1000 genomes]
rs618602	0.83[ASN][1000 genomes]
rs61880825	0.80[ASN][1000 genomes]
rs620937	0.85[ASN][1000 genomes]
rs627118	0.83[ASN][1000 genomes]
rs627748	0.83[ASN][1000 genomes]
rs628063	0.83[ASN][1000 genomes]
rs628403	0.83[ASN][1000 genomes]
rs629968	0.83[ASN][1000 genomes]
rs630362	0.83[ASN][1000 genomes]
rs631520	0.85[ASN][1000 genomes]
rs631918	0.82[ASN][1000 genomes]
rs633656	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs633684	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs634553	0.85[ASN][1000 genomes]
rs641453	0.83[ASN][1000 genomes]
rs643922	0.83[ASN][1000 genomes]
rs646623	0.83[ASN][1000 genomes]
rs646783	0.83[ASN][1000 genomes]
rs655292	0.83[ASN][1000 genomes]
rs657139	0.83[ASN][1000 genomes]
rs657545	0.83[ASN][1000 genomes]
rs659351	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs660317	0.82[ASN][1000 genomes]
rs660790	0.83[ASN][1000 genomes]
rs664158	0.83[ASN][1000 genomes]
rs665122	0.81[ASN][1000 genomes]
rs667976	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs669221	0.85[ASN][1000 genomes]
rs671278	0.83[ASN][1000 genomes]
rs675802	0.83[ASN][1000 genomes]
rs677146	0.86[ASN][1000 genomes]
rs677212	0.83[ASN][1000 genomes]
rs677575	0.83[ASN][1000 genomes]
rs678664	0.83[ASN][1000 genomes]
rs685328	0.83[ASN][1000 genomes]
rs688218	0.83[ASN][1000 genomes]
rs688490	0.83[ASN][1000 genomes]
rs688611	0.83[ASN][1000 genomes]
rs693986	0.83[ASN][1000 genomes]
rs7077286	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7912050	0.80[ASN][1000 genomes]
rs840105	0.82[ASN][1000 genomes]
rs840106	0.82[ASN][1000 genomes]
rs923907	0.80[ASN][1000 genomes]
rs979009	0.83[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117207200-117220200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr10:117218200-117220200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr10:117219200-117220200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr10:117219400-117220000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr10:117219400-117220200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr10:117219600-117220200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr10:117219600-117220200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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