Variant report

Variant	rs11197462
Chromosome Location	chr10:117624853-117624854
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10787603	0.85[ASN][1000 genomes]
rs10787607	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885816	0.84[ASN][1000 genomes]
rs10885821	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10885822	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11197453	0.84[ASN][1000 genomes]
rs11197460	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11197464	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11593928	0.81[ASN][1000 genomes]
rs12256848	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12413701	0.99[ASN][1000 genomes]
rs1552066	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2420115	0.82[ASN][1000 genomes]
rs2420121	0.85[ASN][1000 genomes]
rs2420122	0.85[ASN][1000 genomes]
rs2420126	0.94[ASN][1000 genomes]
rs2907531	0.80[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2907552	0.88[ASN][1000 genomes]
rs2907553	0.86[ASN][1000 genomes]
rs2907554	0.86[ASN][1000 genomes]
rs2907555	0.81[ASN][1000 genomes]
rs2907556	0.86[ASN][1000 genomes]
rs2907558	0.86[ASN][1000 genomes]
rs2907559	0.86[ASN][1000 genomes]
rs2907561	0.81[ASN][1000 genomes]
rs2907567	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2907569	0.85[ASN][1000 genomes]
rs2907570	0.84[ASN][1000 genomes]
rs2907572	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2907573	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2907575	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2907576	0.83[ASN][1000 genomes]
rs2907577	0.83[ASN][1000 genomes]
rs2907578	0.83[ASN][1000 genomes]
rs2907580	0.82[ASN][1000 genomes]
rs2907582	0.82[ASN][1000 genomes]
rs2907585	0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2927373	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2960659	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2960664	0.85[ASN][1000 genomes]
rs2960665	0.85[ASN][1000 genomes]
rs2960668	0.86[ASN][1000 genomes]
rs2960670	0.86[ASN][1000 genomes]
rs2960671	0.81[ASN][1000 genomes]
rs2960672	0.81[ASN][1000 genomes]
rs2960675	0.86[ASN][1000 genomes]
rs2960678	0.91[ASN][1000 genomes]
rs2960679	0.91[ASN][1000 genomes]
rs2960729	0.82[ASN][1000 genomes]
rs4447088	0.83[ASN][1000 genomes]
rs6585366	0.82[ASN][1000 genomes]
rs725556	0.83[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117612200-117628000	Weak transcription	Ovary	ovary
2	chr10:117616600-117625200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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