Variant report

Variant	rs11206716
Chromosome Location	chr1:56497790-56497791
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10489774	0.89[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10489776	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10888951	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10888952	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11206717	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11206718	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11206719	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11206720	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11206721	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11206722	0.89[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11206723	0.93[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11206725	0.82[AFR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11206726	0.96[ASN][1000 genomes]
rs11206728	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1156339	0.82[EUR][1000 genomes]
rs12026783	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12121666	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12122883	0.88[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12122947	0.86[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12125402	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12128890	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12132353	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12133569	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12137810	0.86[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12139823	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12143504	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12564597	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12564930	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1331853	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1416127	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17404628	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2110031	0.87[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2110032	0.91[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2159869	0.89[AFR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2159870	0.89[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2192107	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4278395	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58305300	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6683440	0.93[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6688604	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6704036	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7355027	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7355032	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56485200-56501800	Weak transcription	Aorta	Aorta
2	chr1:56492400-56506400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56495400-56500400	Weak transcription	Right Atrium	heart
4	chr1:56496200-56500800	Enhancers	Hela-S3	cervix
5	chr1:56497200-56499200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:56497400-56498600	Weak transcription	Placenta	Placenta
7	chr1:56497400-56501800	Weak transcription	Fetal Lung	lung
8	chr1:56497600-56498200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:56497600-56498200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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