The 2.0 version of rSNPBase

Variant report

Variant rs11207246
Chromosome Location chr1:58977328-58977329
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:58931200-59010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:58933800-58984800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:58934800-58994000 Weak transcription HSMM muscle
4 chr1:58946200-58979600 Weak transcription GM12878-XiMat blood
5 chr1:58946400-58993800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:58953200-58986000 Weak transcription Colonic Mucosa Colon
7 chr1:58953600-58999200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:58955000-58986400 Weak transcription Gastric stomach
9 chr1:58955000-58988200 Weak transcription Fetal Muscle Trunk muscle
10 chr1:58963800-58999000 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:58964200-58978600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr1:58964800-58986400 Weak transcription K562 blood
13 chr1:58966600-59010600 Weak transcription Placenta Placenta
14 chr1:58967600-59010600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:58968200-58986400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:58968400-58984600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:58973800-58980600 Strong transcription Primary B cells from peripheral blood blood
18 chr1:58974400-58978600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:58974600-58987600 Weak transcription Right Ventricle heart
20 chr1:58974800-58977800 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:58974800-58978800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr1:58974800-58981800 Weak transcription Brain Substantia Nigra brain
23 chr1:58974800-58984600 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr1:58974800-58984600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:58974800-58984800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:58974800-58991600 Weak transcription Esophagus oesophagus
27 chr1:58974800-59005000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr1:58974800-59010800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:58974800-59011800 Weak transcription Spleen Spleen
30 chr1:58975000-59010600 Weak transcription Stomach Smooth Muscle stomach
31 chr1:58975000-59010800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:58975200-58977800 Weak transcription Fetal Heart heart
33 chr1:58976000-58978600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:58976200-58977400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
35 chr1:58976200-58977600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
36 chr1:58976600-58977400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:58976600-58977400 ZNF genes & repeats Primary B cells from cord blood blood
38 chr1:58976600-58977400 ZNF genes & repeats Brain Anterior Caudate brain
39 chr1:58976600-58977400 ZNF genes & repeats Brain Inferior Temporal Lobe brain
40 chr1:58976600-58977400 Strong transcription Skeletal Muscle Female skeletal muscle
41 chr1:58976600-58978400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:58976600-58980600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:58976800-58977400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
44 chr1:58976800-58977400 ZNF genes & repeats Primary hematopoietic stem cells blood
45 chr1:58976800-58977400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr1:58976800-58977400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:58976800-58977400 ZNF genes & repeats Fetal Kidney kidney
48 chr1:58976800-58977400 ZNF genes & repeats Fetal Lung lung
49 chr1:58976800-58977400 ZNF genes & repeats Fetal Muscle Leg muscle
50 chr1:58976800-58977400 ZNF genes & repeats Psoas Muscle Psoas

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015