The 2.0 version of rSNPBase

Variant report

Variant rs11207255
Chromosome Location chr1:59013054-59013055
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59011000-59013200 Active TSS Brain Angular Gyrus brain
2 chr1:59011200-59013200 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr1:59011200-59013200 Active TSS Rectal Mucosa Donor 29 rectum
4 chr1:59011200-59013200 Active TSS A549 lung
5 chr1:59011400-59013200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:59011400-59013200 Active TSS Brain Anterior Caudate brain
7 chr1:59011400-59013200 Active TSS NHDF-Ad bronchial
8 chr1:59011600-59013200 Active TSS Brain Cingulate Gyrus brain
9 chr1:59011600-59013200 Active TSS HMEC breast
10 chr1:59012400-59015400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:59012600-59013200 Flanking Active TSS Dnd41 blood
12 chr1:59012600-59016200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:59012800-59013200 Enhancers Hela-S3 cervix
14 chr1:59012800-59013800 Weak transcription Esophagus oesophagus
15 chr1:59012800-59014200 Weak transcription Primary monocytes fromperipheralblood blood
16 chr1:59012800-59014200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:59012800-59014200 Weak transcription Fetal Intestine Large intestine
18 chr1:59012800-59014200 Weak transcription Ovary ovary
19 chr1:59012800-59014600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr1:59012800-59014600 Weak transcription Fetal Intestine Small intestine
21 chr1:59012800-59014800 Enhancers Primary neutrophils fromperipheralblood blood
22 chr1:59012800-59015200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:59012800-59016000 Enhancers HepG2 liver
24 chr1:59012800-59016600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:59012800-59017400 Weak transcription Pancreas Pancrea
26 chr1:59012800-59017600 Weak transcription Aorta Aorta
27 chr1:59013000-59013200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:59013000-59013200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:59013000-59013200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:59013000-59013200 Enhancers Brain Substantia Nigra brain
31 chr1:59013000-59013200 Enhancers Fetal Brain Male brain
32 chr1:59013000-59013200 Flanking Active TSS Fetal Brain Female brain
33 chr1:59013000-59013200 Enhancers Fetal Heart heart
34 chr1:59013000-59013200 Enhancers Pancreatic Islets Pancreatic Islet
35 chr1:59013000-59013200 Enhancers Fetal Lung lung
36 chr1:59013000-59013200 Active TSS GM12878-XiMat blood
37 chr1:59013000-59013400 Enhancers Fetal Stomach stomach
38 chr1:59013000-59013400 Enhancers K562 blood
39 chr1:59013000-59014400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:59013000-59014400 Weak transcription Fetal Kidney kidney
41 chr1:59013000-59014600 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr1:59013000-59014600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:59013000-59014800 Weak transcription Primary hematopoietic stem cells blood
44 chr1:59013000-59014800 Enhancers Monocytes-CD14+_RO01746 blood
45 chr1:59013000-59016600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:59013000-59016600 Weak transcription Brain Hippocampus Middle brain
47 chr1:59013000-59016600 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015