The 2.0 version of rSNPBase

Variant report

Variant rs11582299
Chromosome Location chr1:59047590-59047591
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59043200-59049200 Weak transcription Gastric stomach
2 chr1:59043400-59049000 Weak transcription Pancreas Pancrea
3 chr1:59043400-59049800 Weak transcription Ovary ovary
4 chr1:59043600-59049200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:59043800-59049000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:59043800-59049000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:59043800-59049200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:59043800-59049200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:59044000-59049000 Weak transcription Fetal Lung lung
10 chr1:59044000-59049000 Weak transcription Osteobl bone
11 chr1:59044000-59049200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:59044000-59049200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:59044000-59049400 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:59044000-59049800 Weak transcription Brain Angular Gyrus brain
15 chr1:59044200-59049000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:59044200-59049000 Weak transcription Spleen Spleen
17 chr1:59044200-59049200 Weak transcription Adipose Nuclei Adipose
18 chr1:59044400-59049000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:59044400-59049000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:59044400-59049000 Weak transcription Stomach Mucosa stomach
21 chr1:59045400-59049000 Weak transcription Hela-S3 cervix
22 chr1:59045400-59049000 Weak transcription HMEC breast
23 chr1:59046000-59047600 Weak transcription GM12878-XiMat blood
24 chr1:59046000-59049000 Weak transcription Lung lung
25 chr1:59046200-59049000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:59046200-59049000 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:59046200-59049000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:59046200-59049000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:59046200-59049000 Weak transcription Placenta Placenta
30 chr1:59046200-59049000 Weak transcription NHEK skin
31 chr1:59046800-59047800 Enhancers HSMMtube muscle
32 chr1:59046800-59047800 Enhancers HUVEC blood vessel
33 chr1:59047000-59049000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:59047400-59047600 Enhancers HSMM muscle
35 chr1:59047400-59047800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:59047400-59047800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:59047400-59047800 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015