The 2.0 version of rSNPBase

Variant report

Variant rs10889104
Chromosome Location chr1:59046496-59046497
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59043200-59047400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:59043200-59049200 Weak transcription Gastric stomach
3 chr1:59043400-59049000 Weak transcription Pancreas Pancrea
4 chr1:59043400-59049800 Weak transcription Ovary ovary
5 chr1:59043600-59049200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:59043800-59049000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:59043800-59049000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:59043800-59049200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:59043800-59049200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:59044000-59049000 Weak transcription Fetal Lung lung
11 chr1:59044000-59049000 Weak transcription Osteobl bone
12 chr1:59044000-59049200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr1:59044000-59049200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:59044000-59049400 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:59044000-59049800 Weak transcription Brain Angular Gyrus brain
16 chr1:59044200-59046800 Weak transcription HUVEC blood vessel
17 chr1:59044200-59049000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:59044200-59049000 Weak transcription Spleen Spleen
19 chr1:59044200-59049200 Weak transcription Adipose Nuclei Adipose
20 chr1:59044400-59049000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:59044400-59049000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:59044400-59049000 Weak transcription Stomach Mucosa stomach
23 chr1:59045400-59047200 Enhancers Brain Substantia Nigra brain
24 chr1:59045400-59049000 Weak transcription Hela-S3 cervix
25 chr1:59045400-59049000 Weak transcription HMEC breast
26 chr1:59045600-59046600 Weak transcription Brain Cingulate Gyrus brain
27 chr1:59045600-59047200 Enhancers Brain Germinal Matrix brain
28 chr1:59046000-59047400 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr1:59046000-59047600 Weak transcription GM12878-XiMat blood
30 chr1:59046000-59049000 Weak transcription Lung lung
31 chr1:59046200-59049000 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr1:59046200-59049000 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr1:59046200-59049000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:59046200-59049000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:59046200-59049000 Weak transcription Placenta Placenta
36 chr1:59046200-59049000 Weak transcription NHEK skin
37 chr1:59046400-59046800 Weak transcription HSMMtube muscle
38 chr1:59046400-59046800 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr1:59046400-59047200 Enhancers Brain Inferior Temporal Lobe brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015