The 2.0 version of rSNPBase

Variant report

Variant rs12092564
Chromosome Location chr1:59053083-59053084
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59049400-59057800 Weak transcription Gastric stomach
2 chr1:59050600-59057400 Weak transcription Right Atrium heart
3 chr1:59051200-59056000 Weak transcription Pancreas Pancrea
4 chr1:59051200-59063400 Weak transcription Primary neutrophils fromperipheralblood blood
5 chr1:59051800-59057600 Weak transcription A549 lung
6 chr1:59052000-59057200 Weak transcription Hela-S3 cervix
7 chr1:59052200-59054200 Weak transcription Spleen Spleen
8 chr1:59052200-59057000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:59052400-59053800 Weak transcription NHEK skin
10 chr1:59052400-59054000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:59052400-59054200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:59052400-59055600 Weak transcription NHDF-Ad bronchial
13 chr1:59052400-59056800 Weak transcription Aorta Aorta
14 chr1:59052400-59058000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:59052600-59057800 Weak transcription NH-A brain
16 chr1:59052600-59057800 Weak transcription NHLF lung
17 chr1:59052800-59054000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:59052800-59054200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:59052800-59054200 Weak transcription Placenta Placenta
20 chr1:59052800-59054400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:59052800-59054600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:59052800-59054600 Weak transcription Lung lung
23 chr1:59052800-59055800 Weak transcription HMEC breast
24 chr1:59052800-59056400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:59052800-59057200 Weak transcription HSMMtube muscle
26 chr1:59052800-59057400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:59052800-59057400 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:59052800-59057400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:59052800-59057400 Weak transcription Esophagus oesophagus
30 chr1:59052800-59057400 Weak transcription Ovary ovary
31 chr1:59052800-59057400 Weak transcription HSMM muscle
32 chr1:59052800-59057600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:59053000-59054000 Weak transcription Fetal Lung lung
34 chr1:59053000-59057200 Weak transcription HUVEC blood vessel
35 chr1:59053000-59057600 Weak transcription Osteobl bone

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Last update: Aug 31, 2015