The 2.0 version of rSNPBase

Variant report

Variant rs6663327
Chromosome Location chr1:59049933-59049934
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59049000-59050000 Enhancers Osteobl bone
2 chr1:59049000-59050200 Flanking Active TSS Primary B cells from cord blood blood
3 chr1:59049000-59050200 Flanking Active TSS HUVEC blood vessel
4 chr1:59049000-59050400 Flanking Active TSS GM12878-XiMat blood
5 chr1:59049000-59050800 Enhancers Placenta Placenta
6 chr1:59049000-59050800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr1:59049000-59051000 Enhancers Primary monocytes fromperipheralblood blood
8 chr1:59049000-59051000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr1:59049000-59051200 Enhancers Lung lung
10 chr1:59049000-59051200 Enhancers Stomach Mucosa stomach
11 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells blood
12 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:59049000-59052000 Enhancers HSMMtube muscle
14 chr1:59049000-59052200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:59049000-59052400 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:59049000-59052400 Enhancers Fetal Lung lung
17 chr1:59049000-59052800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:59049000-59052800 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr1:59049200-59050000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:59049200-59050000 Enhancers A549 lung
21 chr1:59049200-59050200 Flanking Active TSS HMEC breast
22 chr1:59049200-59050400 Enhancers Fetal Stomach stomach
23 chr1:59049200-59050400 Flanking Active TSS Hela-S3 cervix
24 chr1:59049200-59050400 Flanking Active TSS NHEK skin
25 chr1:59049200-59050600 Enhancers Fetal Muscle Leg muscle
26 chr1:59049200-59050600 Enhancers HepG2 liver
27 chr1:59049200-59050800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:59049200-59051200 Enhancers Duodenum Smooth Muscle Duodenum
29 chr1:59049200-59051200 Enhancers Rectal Smooth Muscle rectum
30 chr1:59049200-59051400 Enhancers K562 blood
31 chr1:59049200-59051600 Enhancers Adipose Nuclei Adipose
32 chr1:59049200-59052400 Enhancers Aorta Aorta
33 chr1:59049200-59052400 Enhancers NHDF-Ad bronchial
34 chr1:59049200-59052800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:59049200-59052800 Enhancers Esophagus oesophagus
36 chr1:59049400-59050400 Weak transcription Pancreas Pancrea
37 chr1:59049400-59050800 Weak transcription Spleen Spleen
38 chr1:59049400-59051000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:59049400-59051400 Enhancers Placenta Amnion Placenta Amnion
40 chr1:59049400-59057800 Weak transcription Gastric stomach
41 chr1:59049600-59051200 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr1:59049600-59051200 Enhancers Colon Smooth Muscle Colon
43 chr1:59049800-59050000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:59049800-59050000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:59049800-59050000 Enhancers Brain Angular Gyrus brain
46 chr1:59049800-59050000 Active TSS Duodenum Mucosa Duodenum
47 chr1:59049800-59050000 Enhancers Rectal Mucosa Donor 31 rectum
48 chr1:59049800-59050000 Flanking Active TSS NH-A brain
49 chr1:59049800-59050200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:59049800-59050200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015