The 2.0 version of rSNPBase

Variant report

Variant rs11581594
Chromosome Location chr1:59049479-59049480
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59043400-59049800 Weak transcription Ovary ovary
2 chr1:59044000-59049800 Weak transcription Brain Angular Gyrus brain
3 chr1:59049000-59049600 Enhancers Muscle Satellite Cultured Cells --
4 chr1:59049000-59049800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:59049000-59049800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:59049000-59049800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:59049000-59049800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:59049000-59049800 Enhancers HSMM muscle
9 chr1:59049000-59049800 Enhancers NH-A brain
10 chr1:59049000-59049800 Enhancers NHLF lung
11 chr1:59049000-59050000 Enhancers Osteobl bone
12 chr1:59049000-59050200 Flanking Active TSS Primary B cells from cord blood blood
13 chr1:59049000-59050200 Flanking Active TSS HUVEC blood vessel
14 chr1:59049000-59050400 Flanking Active TSS GM12878-XiMat blood
15 chr1:59049000-59050800 Enhancers Placenta Placenta
16 chr1:59049000-59050800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr1:59049000-59051000 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:59049000-59051000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
19 chr1:59049000-59051200 Enhancers Lung lung
20 chr1:59049000-59051200 Enhancers Stomach Mucosa stomach
21 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells blood
22 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:59049000-59052000 Enhancers HSMMtube muscle
24 chr1:59049000-59052200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:59049000-59052400 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr1:59049000-59052400 Enhancers Fetal Lung lung
27 chr1:59049000-59052800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:59049000-59052800 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr1:59049200-59049800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:59049200-59049800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:59049200-59049800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:59049200-59049800 Enhancers Duodenum Mucosa Duodenum
33 chr1:59049200-59050000 Enhancers Sigmoid Colon Sigmoid Colon
34 chr1:59049200-59050000 Enhancers A549 lung
35 chr1:59049200-59050200 Flanking Active TSS HMEC breast
36 chr1:59049200-59050400 Enhancers Fetal Stomach stomach
37 chr1:59049200-59050400 Flanking Active TSS Hela-S3 cervix
38 chr1:59049200-59050400 Flanking Active TSS NHEK skin
39 chr1:59049200-59050600 Enhancers Fetal Muscle Leg muscle
40 chr1:59049200-59050600 Enhancers HepG2 liver
41 chr1:59049200-59050800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:59049200-59051200 Enhancers Duodenum Smooth Muscle Duodenum
43 chr1:59049200-59051200 Enhancers Rectal Smooth Muscle rectum
44 chr1:59049200-59051400 Enhancers K562 blood
45 chr1:59049200-59051600 Enhancers Adipose Nuclei Adipose
46 chr1:59049200-59052400 Enhancers Aorta Aorta
47 chr1:59049200-59052400 Enhancers NHDF-Ad bronchial
48 chr1:59049200-59052800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:59049200-59052800 Enhancers Esophagus oesophagus
50 chr1:59049400-59049800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015