The 2.0 version of rSNPBase

Variant report

Variant rs67673245
Chromosome Location chr1:59050723-59050724
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59049000-59050800 Enhancers Placenta Placenta
2 chr1:59049000-59050800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr1:59049000-59051000 Enhancers Primary monocytes fromperipheralblood blood
4 chr1:59049000-59051000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr1:59049000-59051200 Enhancers Lung lung
6 chr1:59049000-59051200 Enhancers Stomach Mucosa stomach
7 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells blood
8 chr1:59049000-59051600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:59049000-59052000 Enhancers HSMMtube muscle
10 chr1:59049000-59052200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:59049000-59052400 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:59049000-59052400 Enhancers Fetal Lung lung
13 chr1:59049000-59052800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:59049000-59052800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:59049200-59050800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:59049200-59051200 Enhancers Duodenum Smooth Muscle Duodenum
17 chr1:59049200-59051200 Enhancers Rectal Smooth Muscle rectum
18 chr1:59049200-59051400 Enhancers K562 blood
19 chr1:59049200-59051600 Enhancers Adipose Nuclei Adipose
20 chr1:59049200-59052400 Enhancers Aorta Aorta
21 chr1:59049200-59052400 Enhancers NHDF-Ad bronchial
22 chr1:59049200-59052800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:59049200-59052800 Enhancers Esophagus oesophagus
24 chr1:59049400-59050800 Weak transcription Spleen Spleen
25 chr1:59049400-59051000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:59049400-59051400 Enhancers Placenta Amnion Placenta Amnion
27 chr1:59049400-59057800 Weak transcription Gastric stomach
28 chr1:59049600-59051200 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr1:59049600-59051200 Enhancers Colon Smooth Muscle Colon
30 chr1:59049800-59051000 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr1:59049800-59051200 Enhancers Stomach Smooth Muscle stomach
32 chr1:59049800-59051600 Enhancers Skeletal Muscle Female skeletal muscle
33 chr1:59049800-59052800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:59049800-59052800 Enhancers Ovary ovary
35 chr1:59050000-59051800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:59050200-59050800 Enhancers Duodenum Mucosa Duodenum
37 chr1:59050200-59051600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:59050200-59052400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:59050200-59052800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:59050200-59052800 Enhancers HMEC breast
41 chr1:59050200-59052800 Enhancers HSMM muscle
42 chr1:59050200-59053000 Enhancers HUVEC blood vessel
43 chr1:59050400-59050800 Weak transcription Fetal Stomach stomach
44 chr1:59050400-59050800 Enhancers NHEK skin
45 chr1:59050400-59051200 Enhancers Pancreas Pancrea
46 chr1:59050400-59051400 Enhancers GM12878-XiMat blood
47 chr1:59050400-59052000 Enhancers Hela-S3 cervix
48 chr1:59050400-59052400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:59050400-59052400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:59050400-59052600 Enhancers NH-A brain

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Last update: Aug 31, 2015