The 2.0 version of rSNPBase

Variant report

Variant rs11208031
Chromosome Location chr1:63253014-63253015
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63250400-63254000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:63250600-63262400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:63250600-63266600 Weak transcription Gastric stomach
4 chr1:63250800-63253200 Active TSS Brain Angular Gyrus brain
5 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:63251000-63259600 Weak transcription Stomach Mucosa stomach
7 chr1:63251000-63266600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:63251000-63269600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
10 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
11 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
12 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
14 chr1:63251200-63260200 Weak transcription Primary hematopoietic stem cells blood
15 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:63251400-63257200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:63251400-63259000 Weak transcription Primary B cells from peripheral blood blood
18 chr1:63251400-63261200 Weak transcription Primary monocytes fromperipheralblood blood
19 chr1:63251400-63264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:63251400-63275600 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:63251800-63260800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:63251800-63273000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:63252000-63266600 Weak transcription Colon Smooth Muscle Colon
24 chr1:63252000-63269600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:63252200-63258400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:63252400-63254200 Enhancers Primary B cells from cord blood blood
28 chr1:63252600-63254200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:63252800-63253200 Active TSS Brain Cingulate Gyrus brain
30 chr1:63252800-63253200 Active TSS Brain Inferior Temporal Lobe brain
31 chr1:63252800-63253200 Enhancers Brain Substantia Nigra brain
32 chr1:63252800-63253400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:63252800-63253800 Weak transcription HepG2 liver
34 chr1:63252800-63259000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:63252800-63272400 Weak transcription Primary T cells from cord blood blood
36 chr1:63253000-63253200 Flanking Active TSS Brain Anterior Caudate brain
37 chr1:63253000-63253600 Enhancers Brain Hippocampus Middle brain
38 chr1:63253000-63253800 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015