Variant report

Variant	rs11218115
Chromosome Location	chr11:120893187-120893188
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFYB	chr11:120892788-120893273	K562	blood:	n/a	n/a

Variant related genes	Relation type
TBCEL	TF binding region

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10502245	0.90[ASN][1000 genomes]
rs10892662	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10892663	0.93[ASN][1000 genomes]
rs10892664	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10892665	0.90[ASN][1000 genomes]
rs10892666	0.89[ASN][1000 genomes]
rs10892667	0.89[ASN][1000 genomes]
rs10892668	0.88[ASN][1000 genomes]
rs10892669	0.89[ASN][1000 genomes]
rs10892670	0.87[ASN][1000 genomes]
rs11218118	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11218120	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11218121	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11218122	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11218123	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11218125	0.93[ASN][1000 genomes]
rs11218126	0.93[ASN][1000 genomes]
rs11218127	0.90[ASN][1000 genomes]
rs11218128	0.91[ASN][1000 genomes]
rs11218135	0.87[ASN][1000 genomes]
rs11218137	0.87[ASN][1000 genomes]
rs11218139	0.86[ASN][1000 genomes]
rs11218140	0.84[ASN][1000 genomes]
rs12225989	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12226639	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12274032	0.88[ASN][1000 genomes]
rs12274094	0.86[ASN][1000 genomes]
rs12283211	0.95[ASN][1000 genomes]
rs12576572	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12576574	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12576758	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12576759	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12577611	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17124739	0.90[ASN][1000 genomes]
rs17124764	0.88[ASN][1000 genomes]
rs1939004	0.93[ASN][1000 genomes]
rs2000525	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2000526	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2000527	0.95[ASN][1000 genomes]
rs2000528	0.95[ASN][1000 genomes]
rs2186601	0.88[ASN][1000 genomes]
rs2298491	0.88[ASN][1000 genomes]
rs34929374	0.86[ASN][1000 genomes]
rs3758891	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3824976	0.93[ASN][1000 genomes]
rs4396299	0.89[ASN][1000 genomes]
rs4594010	0.85[ASN][1000 genomes]
rs56675723	0.89[ASN][1000 genomes]
rs57401958	0.87[ASN][1000 genomes]
rs57826163	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58204590	0.87[ASN][1000 genomes]
rs61903185	0.95[ASN][1000 genomes]
rs6589854	0.86[ASN][1000 genomes]
rs6589855	0.87[ASN][1000 genomes]
rs6589856	0.88[ASN][1000 genomes]
rs67932968	0.89[ASN][1000 genomes]
rs68097814	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7122879	0.96[ASN][1000 genomes]
rs7478744	0.88[ASN][1000 genomes]
rs7927356	0.86[ASN][1000 genomes]
rs7928550	0.90[ASN][1000 genomes]
rs7931603	0.86[ASN][1000 genomes]
rs7940619	0.86[ASN][1000 genomes]
rs7947565	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7952619	0.93[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120890200-120893800	Weak transcription	Fetal Lung	lung
2	chr11:120890400-120894400	Weak transcription	Esophagus	oesophagus
3	chr11:120891000-120894000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links