Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10893727	0.83[ASN][1000 genomes]
rs10893728	0.83[ASN][1000 genomes]
rs10893739	0.95[ASN][1000 genomes]
rs10893741	0.95[ASN][1000 genomes]
rs10893750	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10893752	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10893754	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11221020	0.83[ASN][1000 genomes]
rs11221033	0.91[ASN][1000 genomes]
rs11221034	0.91[ASN][1000 genomes]
rs11221036	0.92[ASN][1000 genomes]
rs11221037	0.95[ASN][1000 genomes]
rs11221044	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11221047	0.99[ASN][1000 genomes]
rs11221048	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11221055	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11221056	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12791553	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12800826	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1364789	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1425218	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1425219	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1425220	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1425221	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34815995	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61908319	0.97[ASN][1000 genomes]
rs970534	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898445	chr11:127377733-127713173	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1037485	chr11:127582314-128301106	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv1818193	chr11:127623438-127663921	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv556535	chr11:127656196-127737929	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:127660400-127664800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr11:127660400-127664800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr11:127660400-127664800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr11:127660600-127665600	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr11:127661400-127664800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:127662200-127664600	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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