The 2.0 version of rSNPBase

Variant report

Variant rs11238542
Chromosome Location chr10:43934622-43934623
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43933000-43940200 Weak transcription Pancreas Pancrea
2 chr10:43933000-43947200 Weak transcription Spleen Spleen
3 chr10:43933000-43949600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr10:43933000-43950200 Weak transcription Lung lung
5 chr10:43933200-43935000 Weak transcription GM12878-XiMat blood
6 chr10:43933200-43935600 Weak transcription Fetal Stomach stomach
7 chr10:43933200-43936000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr10:43933200-43936800 Enhancers Primary monocytes fromperipheralblood blood
9 chr10:43933200-43936800 Enhancers Primary B cells from peripheral blood blood
10 chr10:43933200-43937600 Weak transcription Placenta Amnion Placenta Amnion
11 chr10:43933200-43938600 Weak transcription Fetal Intestine Small intestine
12 chr10:43933200-43939600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr10:43933200-43940600 Weak transcription Primary T cells from cord blood blood
14 chr10:43933200-43947600 Weak transcription Brain Anterior Caudate brain
15 chr10:43933200-43948000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr10:43933200-43950000 Weak transcription Brain Substantia Nigra brain
17 chr10:43933200-43950200 Weak transcription Brain Angular Gyrus brain
18 chr10:43933200-43950200 Weak transcription Brain Hippocampus Middle brain
19 chr10:43933200-43950200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr10:43933200-43950200 Weak transcription Fetal Muscle Trunk muscle
21 chr10:43933400-43936600 Enhancers Primary B cells from cord blood blood
22 chr10:43933400-43939800 Weak transcription Fetal Intestine Large intestine
23 chr10:43933400-43940600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr10:43933400-43948000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr10:43933600-43935600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr10:43933600-43935800 Weak transcription HepG2 liver
27 chr10:43933600-43936400 Enhancers Primary neutrophils fromperipheralblood blood
28 chr10:43933600-43937600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr10:43933600-43940000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr10:43933600-43947200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr10:43933600-43947400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr10:43933600-43948200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr10:43933600-43948200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr10:43933600-43949800 Weak transcription Adipose Nuclei Adipose
35 chr10:43933800-43936800 Enhancers Monocytes-CD14+_RO01746 blood
36 chr10:43933800-43939400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr10:43933800-43946600 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr10:43934200-43939800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr10:43934200-43942200 Weak transcription Fetal Lung lung
40 chr10:43934200-43949200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr10:43934400-43940000 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015