The 2.0 version of rSNPBase

Variant report

Variant rs2492411
Chromosome Location chr10:43922585-43922586
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43916800-43931400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr10:43916800-43931600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr10:43916800-43931600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr10:43917000-43931600 Weak transcription Fetal Brain Female brain
5 chr10:43917200-43930800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr10:43917200-43930800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr10:43917200-43931600 Weak transcription Brain Anterior Caudate brain
8 chr10:43917400-43930400 Weak transcription Brain Cingulate Gyrus brain
9 chr10:43917400-43930800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr10:43917400-43930800 Weak transcription Brain Hippocampus Middle brain
11 chr10:43917400-43930800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr10:43917400-43930800 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr10:43917400-43931600 Weak transcription Brain Angular Gyrus brain
14 chr10:43917600-43930800 Weak transcription Duodenum Mucosa Duodenum
15 chr10:43917600-43930800 Weak transcription Fetal Muscle Leg muscle
16 chr10:43917600-43931600 Weak transcription Right Ventricle heart
17 chr10:43918000-43928000 Weak transcription Fetal Intestine Small intestine
18 chr10:43919800-43926400 Weak transcription K562 blood
19 chr10:43920000-43930400 Weak transcription Liver Liver
20 chr10:43920000-43930400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr10:43920200-43923600 Weak transcription HepG2 liver
22 chr10:43920200-43925200 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr10:43920200-43931600 Weak transcription Fetal Lung lung
24 chr10:43921200-43922600 Enhancers Primary T cells fromperipheralblood blood
25 chr10:43921200-43922600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr10:43921200-43923000 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr10:43921200-43923400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr10:43921200-43923400 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr10:43921200-43923400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr10:43921200-43923800 Enhancers Primary T helper cells PMA-I stimulated --
31 chr10:43921400-43923600 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr10:43921600-43922800 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr10:43921600-43923800 Enhancers Primary B cells from peripheral blood blood
34 chr10:43921800-43926600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr10:43921800-43931200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr10:43922000-43922800 Enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr10:43922200-43922800 Enhancers Fetal Thymus thymus
38 chr10:43922400-43922600 Active TSS Primary T cells from cord blood blood
39 chr10:43922400-43922600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
40 chr10:43922400-43922600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr10:43922400-43922600 Enhancers GM12878-XiMat blood
42 chr10:43922400-43922800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr10:43922400-43923000 Enhancers Primary hematopoietic stem cells blood
44 chr10:43922400-43923400 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr10:43922400-43923600 Enhancers Primary B cells from cord blood blood
46 chr10:43922400-43923800 Enhancers Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015