Variant report

Variant	rs2066044
Chromosome Location	chr10:43916493-43916494
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:43915767-43916741	K562	blood:	n/a	n/a
2	POLR2A	chr10:43915762-43916671	GM12891	blood:	n/a	n/a
3	STAT3	chr10:43916476-43916675	MCF10A-Er-Src	breast:	n/a	n/a
4	POLR2A	chr10:43915752-43916693	GM10847	blood:	n/a	n/a
5	POLR2A	chr10:43915536-43916812	NB4	blood:	n/a	n/a
6	CEBPB	chr10:43916360-43916736	A549	lung:	n/a	chr10:43916554-43916563 chr10:43916552-43916565 chr10:43916554-43916563 chr10:43916554-43916563
7	USF1	chr10:43916411-43916748	SK-N-SH_RA	brain:	n/a	n/a
8	MAFK	chr10:43916004-43916686	HepG2	liver:	n/a	chr10:43916346-43916361
9	POLR2A	chr10:43915681-43916698	Hela-S3	cervix:	n/a	n/a
10	GTF2F1	chr10:43915802-43916750	Hela-S3	cervix:	n/a	n/a
11	CEBPB	chr10:43915807-43916781	H1-hESC	embryonic stem cell:	n/a	chr10:43916554-43916563 chr10:43916552-43916565 chr10:43916554-43916563 chr10:43916554-43916563
12	POLR2A	chr10:43915760-43916771	Hela-S3	cervix:	n/a	n/a
13	MYC	chr10:43915805-43916750	Hela-S3	cervix:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
14	TEAD4	chr10:43916231-43916871	HepG2	liver:	n/a	n/a
15	MAX	chr10:43915494-43916804	K562	blood:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
16	E2F6	chr10:43915581-43916663	K562	blood:	n/a	chr10:43915792-43915800 chr10:43915790-43915804 chr10:43915792-43915800
17	USF1	chr10:43916381-43916755	SK-N-SH	brain:	n/a	n/a
18	MAX	chr10:43915624-43916833	HCT-116	colon:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
19	HMGN3	chr10:43915570-43916890	K562	blood:	n/a	n/a
20	POLR2A	chr10:43915622-43916730	GM19193	blood:	n/a	n/a
21	E2F6	chr10:43915461-43916925	H1-hESC	embryonic stem cell:	n/a	chr10:43915792-43915800 chr10:43915790-43915804 chr10:43915792-43915800
22	RCOR1	chr10:43916421-43916777	K562	blood:	n/a	n/a
23	UBTF	chr10:43915779-43916686	K562	blood:	n/a	n/a
24	GTF2F1	chr10:43916286-43916605	H1-hESC	embryonic stem cell:	n/a	n/a
25	GTF2F1	chr10:43915982-43916616	K562	blood:	n/a	n/a
26	MAX	chr10:43915537-43916780	NB4	blood:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
27	CEBPD	chr10:43916409-43916698	HepG2	liver:	n/a	chr10:43916554-43916563
28	POLR2A	chr10:43915628-43916840	GM12892	blood:	n/a	n/a
29	MYC	chr10:43915763-43917028	MCF10A-Er-Src	breast:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
30	CTCF	chr10:43916380-43916530	Hela-S3	cervix:	n/a	n/a
31	BHLHE40	chr10:43915800-43916872	HepG2	liver:	n/a	chr10:43915960-43915976
32	RELA	chr10:43915826-43916734	GM10847	blood:	n/a	n/a
33	POLR2A	chr10:43916194-43916674	K562	blood:	n/a	n/a
34	ZNF143	chr10:43916474-43916716	K562	blood:	n/a	n/a
35	RCOR1	chr10:43915668-43916797	K562	blood:	n/a	n/a
36	ELF1	chr10:43916243-43916716	A549	lung:	n/a	n/a
37	RAD21	chr10:43916062-43916700	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr10:43916358-43916802	ECC-1	luminal epithelium:	n/a	chr10:43916554-43916563 chr10:43916552-43916565 chr10:43916554-43916563 chr10:43916554-43916563
39	POLR2A	chr10:43915731-43916658	GM12891	blood:	n/a	n/a
40	POLR2A	chr10:43915653-43916727	SK-N-SH	brain:	n/a	n/a
41	GABPA	chr10:43916308-43916578	GM12878	blood:	n/a	n/a
42	PAX5	chr10:43916119-43916617	GM12878	blood:	n/a	n/a
43	POLR2A	chr10:43915693-43916752	ProgFib	skin:	n/a	n/a
44	MAX	chr10:43915575-43916779	H1-hESC	embryonic stem cell:	n/a	chr10:43915985-43915994 chr10:43915983-43915998 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915985-43915995 chr10:43915984-43915994 chr10:43915981-43915996 chr10:43915985-43915995 chr10:43915984-43915993 chr10:43915983-43915996 chr10:43915985-43915994 chr10:43915984-43915995 chr10:43915983-43915996 chr10:43915984-43915995 chr10:43915984-43915994
45	SIN3AK20	chr10:43915644-43916623	PANC-1	pancreas:	n/a	n/a
46	POLR2A	chr10:43915432-43916699	K562	blood:	n/a	n/a
47	POLR2A	chr10:43915678-43916805	HepG2	liver:	n/a	n/a
48	FOS	chr10:43916348-43916725	MCF10A-Er-Src	breast:	n/a	n/a
49	ELF1	chr10:43916308-43916613	HepG2	liver:	n/a	n/a
50	CHD1	chr10:43916002-43916605	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:43914713..43918981-chr10:43928825..43933676,11	MCF-7	breast:
2	chr10:43912793..43917262-chr10:43929806..43934635,10	MCF-7	breast:
3	chr10:43915403..43918859-chr10:43929644..43933431,7	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF487P-1	chr10:43916400-43916514	XLOC_008467
2	lnc-ZNF487P-1	chr10:43916186-43916514	ENSG00000230555.2

Variant related genes	Relation type
ENSG00000221400	TF binding region
ENSG00000243660	Chromatin interaction

Extended variants
information (count: 88 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs10732897	0.89[ASN][1000 genomes]
rs10793430	0.96[ASN][1000 genomes]
rs10793431	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793432	0.81[ASN][1000 genomes]
rs10899794	0.85[JPT][hapmap]
rs10899795	0.84[CEU][hapmap];0.93[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap]
rs10899797	0.85[JPT][hapmap]
rs10899798	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10899799	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11238542	0.91[ASN][1000 genomes]
rs1126487	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12257917	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs12779063	0.81[AMR][1000 genomes]
rs1416226	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2066043	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2247860	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2247979	0.83[CHB][hapmap];0.91[GIH][hapmap];0.85[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.87[AMR][1000 genomes]
rs2247981	0.83[CHB][hapmap];0.91[GIH][hapmap];0.85[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.87[AMR][1000 genomes]
rs2248332	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2248335	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2248469	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2248706	0.96[ASN][1000 genomes]
rs2250444	0.83[CHB][hapmap];0.91[GIH][hapmap];0.85[JPT][hapmap];0.93[LWK][hapmap];0.94[MEX][hapmap];0.84[AMR][1000 genomes]
rs2252783	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2252785	1.00[ASW][hapmap];0.94[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2252800	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2252804	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2255967	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs2256495	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2256613	0.96[ASN][1000 genomes]
rs2259045	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2260162	0.94[ASN][1000 genomes]
rs2260200	0.89[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2261636	0.85[JPT][hapmap];0.84[AMR][1000 genomes]
rs2261665	0.86[ASN][1000 genomes]
rs2265886	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2265952	0.90[AMR][1000 genomes]
rs2265954	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2393954	0.86[ASN][1000 genomes]
rs2492403	0.94[ASN][1000 genomes]
rs2492405	0.89[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2492407	0.87[AMR][1000 genomes]
rs2492408	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2492409	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2492410	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2492411	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2492412	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2493648	0.89[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2812797	0.85[ASN][1000 genomes]
rs2819021	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2819026	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2819032	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2819034	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2999276	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2999282	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2999287	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3000700	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs3006408	0.85[ASN][1000 genomes]
rs3750890	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4551711	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4559639	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4584528	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4597022	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4948726	0.83[CHB][hapmap];0.85[JPT][hapmap];0.84[AMR][1000 genomes]
rs56059584	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs61859002	0.84[AMR][1000 genomes]
rs6421744	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6593513	0.85[JPT][hapmap]
rs7069214	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7070029	0.87[AMR][1000 genomes]
rs7070769	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7081729	0.89[ASN][1000 genomes]
rs7088430	0.81[AMR][1000 genomes]
rs7089290	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7092599	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7894374	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7905676	0.83[CHB][hapmap];0.85[JPT][hapmap]
rs7914140	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7918726	0.96[ASN][1000 genomes]
rs7920539	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9422371	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430159	chr10:43291894-43946294	Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
2	nsv895087	chr10:43783339-43982390	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
3	nsv831842	chr10:43846541-43987501	Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv895088	chr10:43871999-44003101	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
5	nsv825354	chr10:43883418-43949936	Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
6	nsv825355	chr10:43890579-43923802	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
7	nsv825356	chr10:43893080-43946515	Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:43915200-43916600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr10:43915200-43916800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr10:43915200-43916800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
4	chr10:43915400-43916600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:43915400-43916600	Active TSS	Brain Anterior Caudate	brain
6	chr10:43915400-43916600	Active TSS	Brain Cingulate Gyrus	brain
7	chr10:43915400-43916600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
8	chr10:43915400-43916600	Active TSS	Fetal Lung	lung
9	chr10:43915400-43917000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
10	chr10:43915400-43917000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr10:43915600-43916600	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr10:43915600-43916600	Active TSS	iPS-20b Cell Line	embryonic stem cell
13	chr10:43915600-43916600	Active TSS	Breast Myoepithelial Primary Cells	Breast
14	chr10:43915600-43916600	Active TSS	Primary T cells from cord blood	blood
15	chr10:43915600-43916600	Active TSS	Liver	Liver
16	chr10:43915600-43916600	Active TSS	Brain Substantia Nigra	brain
17	chr10:43915600-43916600	Active TSS	Fetal Kidney	kidney
18	chr10:43915600-43916600	Active TSS	Left Ventricle	heart
19	chr10:43915600-43916600	Transcr. at gene 5' and 3'	Right Atrium	heart
20	chr10:43915600-43916600	Active TSS	HSMMtube	muscle
21	chr10:43915600-43916600	Active TSS	NHDF-Ad	bronchial
22	chr10:43915600-43916800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr10:43915600-43916800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr10:43915600-43916800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
25	chr10:43915600-43916800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
26	chr10:43915600-43916800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr10:43915600-43916800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr10:43915600-43916800	Active TSS	Aorta	Aorta
29	chr10:43915600-43916800	Active TSS	Brain Angular Gyrus	brain
30	chr10:43915600-43916800	Active TSS	Duodenum Smooth Muscle	Duodenum
31	chr10:43915600-43916800	Active TSS	Esophagus	oesophagus
32	chr10:43915600-43916800	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
33	chr10:43915600-43916800	Active TSS	Lung	lung
34	chr10:43915600-43916800	Active TSS	Ovary	ovary
35	chr10:43915600-43916800	Active TSS	Psoas Muscle	Psoas
36	chr10:43915600-43916800	Active TSS	Right Ventricle	heart
37	chr10:43915600-43916800	Active TSS	Sigmoid Colon	Sigmoid Colon
38	chr10:43915600-43916800	Flanking Active TSS	HMEC	breast
39	chr10:43915600-43916800	Flanking Active TSS	HUVEC	blood vessel
40	chr10:43915600-43917000	Active TSS	ES-I3 Cell Line	embryonic stem cell
41	chr10:43915600-43917000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
42	chr10:43915600-43917000	Active TSS	Fetal Brain Female	brain
43	chr10:43915600-43917000	Active TSS	Pancreatic Islets	Pancreatic Islet
44	chr10:43915600-43917000	Active TSS	Placenta Amnion	Placenta Amnion
45	chr10:43915600-43917000	Active TSS	Rectal Smooth Muscle	rectum
46	chr10:43915800-43916600	Active TSS	H1 Cell Line	embryonic stem cell
47	chr10:43915800-43916600	Active TSS	iPS-18 Cell Line	embryonic stem cell
48	chr10:43915800-43916600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
49	chr10:43915800-43916600	Active TSS	Primary T helper naive cells from peripheral blood	blood
50	chr10:43915800-43916600	Active TSS	Primary T killer memory cells from peripheral blood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links