Variant report
| Variant | rs11241223 |
|---|---|
| Chromosome Location | chr5:113029187-113029188 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:113027200-113030400 | Enhancers | Fetal Brain Male | brain |
| 2 | chr5:113027200-113030800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr5:113028000-113029600 | Enhancers | Fetal Heart | heart |
| 4 | chr5:113028000-113029800 | Bivalent Enhancer | H9 Derived Neuron Cultured Cells | ES cell derived |
| 5 | chr5:113028200-113029200 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr5:113028200-113029200 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
| 7 | chr5:113028200-113029400 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr5:113028200-113029600 | Enhancers | Left Ventricle | heart |
| 9 | chr5:113028200-113030200 | Enhancers | Fetal Lung | lung |
| 10 | chr5:113028200-113030400 | Enhancers | Fetal Kidney | kidney |
| 11 | chr5:113028200-113031000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr5:113028400-113029200 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 13 | chr5:113028400-113029400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr5:113028400-113029400 | Bivalent/Poised TSS | Brain Anterior Caudate | brain |
| 15 | chr5:113028400-113029400 | Flanking Active TSS | Fetal Brain Female | brain |
| 16 | chr5:113028400-113029600 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 17 | chr5:113028400-113029600 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 18 | chr5:113028400-113029600 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 19 | chr5:113028400-113029800 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 20 | chr5:113028400-113030000 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 21 | chr5:113028400-113030000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 22 | chr5:113028600-113029200 | Active TSS | H9 Cell Line | embryonic stem cell |
| 23 | chr5:113028600-113029200 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
| 24 | chr5:113028600-113029400 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr5:113028600-113029600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 26 | chr5:113028600-113029600 | Active TSS | Brain Substantia Nigra | brain |
| 27 | chr5:113028800-113029200 | Active TSS | H1 Cell Line | embryonic stem cell |
| 28 | chr5:113028800-113029200 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr5:113028800-113029200 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 30 | chr5:113028800-113029200 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 31 | chr5:113028800-113029200 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 32 | chr5:113028800-113029200 | Enhancers | Right Ventricle | heart |
| 33 | chr5:113028800-113029400 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 34 | chr5:113028800-113029400 | Active TSS | Brain Angular Gyrus | brain |
| 35 | chr5:113028800-113029400 | Bivalent/Poised TSS | Brain Cingulate Gyrus | brain |
| 36 | chr5:113028800-113029400 | Bivalent/Poised TSS | Brain Inferior Temporal Lobe | brain |
| 37 | chr5:113028800-113029800 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr5:113029000-113029200 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 39 | chr5:113029000-113029200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 40 | chr5:113029000-113029200 | Bivalent Enhancer | Duodenum Smooth Muscle | Duodenum |
| 41 | chr5:113029000-113029200 | Bivalent Enhancer | Rectal Mucosa Donor 31 | rectum |
| 42 | chr5:113029000-113029200 | Flanking Active TSS | Right Atrium | heart |
| 43 | chr5:113029000-113029200 | Flanking Bivalent TSS/Enh | Skeletal Muscle Female | skeletal muscle |
| 44 | chr5:113029000-113029600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 45 | chr5:113029000-113029600 | Bivalent/Poised TSS | Brain Hippocampus Middle | brain |
| 46 | chr5:113029000-113029600 | Enhancers | Lung | lung |
| 47 | chr5:113029000-113029600 | Bivalent Enhancer | Skeletal Muscle Male | skeletal muscle |
| 48 | chr5:113029000-113030200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
