Variant report

Variant	rs11241224
Chromosome Location	chr5:113037313-113037314
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10035549	0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10050494	0.82[AFR][1000 genomes]
rs10050855	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11241223	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11241226	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12332749	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12332751	0.97[ASN][1000 genomes]
rs1384267	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1384268	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1384269	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1384270	0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1871908	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1871909	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1871911	0.95[ASN][1000 genomes]
rs1871912	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4235748	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4235749	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4235750	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4285208	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4296793	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4331886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4438868	0.84[ASN][1000 genomes]
rs4443413	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4489053	0.87[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs4621553	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4705570	0.80[ASN][1000 genomes]
rs6872692	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6891470	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7443933	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7705873	0.87[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs985411	0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113030400-113038400	Weak transcription	Fetal Kidney	kidney
2	chr5:113035400-113040400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr5:113036000-113037600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr5:113036800-113037400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links