Variant report

Variant	rs12332749
Chromosome Location	chr5:113058484-113058485
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10035549	0.97[ASN][1000 genomes]
rs10035987	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10050494	0.84[AFR][1000 genomes]
rs10050855	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10478140	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10478141	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11241223	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11241224	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11241226	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12332751	0.99[ASN][1000 genomes]
rs12521147	0.84[AMR][1000 genomes]
rs1384267	0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1384268	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1384269	0.97[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1384270	0.93[ASN][1000 genomes]
rs1482347	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1552156	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1552157	0.81[AMR][1000 genomes]
rs1552158	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1842760	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1871908	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1871909	0.97[ASN][1000 genomes]
rs1871911	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1871912	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1988077	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4235748	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4285208	0.97[ASN][1000 genomes]
rs4331886	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4438868	0.82[ASN][1000 genomes]
rs4489053	0.89[AFR][1000 genomes]
rs4705469	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4705470	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6872692	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6891470	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7443933	0.95[ASN][1000 genomes]
rs7705873	0.89[AFR][1000 genomes]
rs7734801	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs985411	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113058000-113059600	Enhancers	Fetal Kidney	kidney
2	chr5:113058000-113059600	Enhancers	Fetal Stomach	stomach
3	chr5:113058200-113059200	Enhancers	Rectal Smooth Muscle	rectum
4	chr5:113058200-113059600	Enhancers	Fetal Lung	lung
5	chr5:113058200-113059600	Enhancers	Stomach Smooth Muscle	stomach
6	chr5:113058400-113059200	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr5:113058400-113059600	Enhancers	Colon Smooth Muscle	Colon

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