Variant report

Variant	rs1988077
Chromosome Location	chr5:113050415-113050416
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10035987	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10478140	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10478141	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11241226	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11746025	1.00[ASN][1000 genomes]
rs12332749	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12521147	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12521149	0.92[AMR][1000 genomes]
rs1482346	0.88[ASN][1000 genomes]
rs1482347	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1552156	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1552157	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1552158	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1842760	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1871908	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1871911	0.83[AMR][1000 genomes]
rs1871912	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2101150	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4103040	0.81[ASN][1000 genomes]
rs4235749	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4235750	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4296793	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4443413	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4621553	1.00[ASN][1000 genomes]
rs4705469	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4705470	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56056094	1.00[ASN][1000 genomes]
rs6872692	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6891470	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7734801	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs985411	0.85[AMR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113049200-113057400	Weak transcription	Fetal Kidney	kidney

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