Variant report

Variant	rs1552157
Chromosome Location	chr5:113056677-113056678
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10035987	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10478140	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10478141	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11746025	0.85[ASN][1000 genomes]
rs12332749	0.81[AMR][1000 genomes]
rs12521147	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs12521149	0.83[AMR][1000 genomes]
rs1482346	0.89[ASN][1000 genomes]
rs1482347	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1552156	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1552158	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1842760	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1871908	0.81[AMR][1000 genomes]
rs1871912	0.81[AMR][1000 genomes]
rs1988077	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4103040	0.82[ASN][1000 genomes]
rs4235749	0.85[ASN][1000 genomes]
rs4235750	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs4296793	0.85[ASN][1000 genomes]
rs4443413	0.85[ASN][1000 genomes]
rs4621553	0.85[ASN][1000 genomes]
rs4705469	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4705470	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56056094	0.85[ASN][1000 genomes]
rs7734801	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs985411	0.81[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113049200-113057400	Weak transcription	Fetal Kidney	kidney
2	chr5:113051000-113058200	Weak transcription	Fetal Lung	lung
3	chr5:113054600-113058400	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr5:113055000-113058200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr5:113056600-113057200	ZNF genes & repeats	Fetal Stomach	stomach

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