Variant report

Variant rs11255996
Chromosome Location chr10:5670832-5670833
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5658000-5673600 Weak transcription Left Ventricle heart
2 chr10:5665200-5671800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr10:5665200-5681800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:5665400-5672600 Weak transcription Lung lung
5 chr10:5665400-5673800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr10:5665400-5680400 Weak transcription Brain Hippocampus Middle brain
7 chr10:5665400-5680600 Weak transcription Fetal Brain Female brain
8 chr10:5665600-5671000 Weak transcription Brain Substantia Nigra brain
9 chr10:5665600-5671000 Weak transcription A549 lung
10 chr10:5665600-5673400 Weak transcription HMEC breast
11 chr10:5665600-5680400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr10:5665600-5680400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr10:5665600-5680400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr10:5665600-5681800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr10:5665600-5698600 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr10:5667200-5674200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr10:5668600-5672000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr10:5668800-5672000 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr10:5668800-5680400 Weak transcription Gastric stomach
20 chr10:5669000-5676400 Enhancers Pancreas Pancrea
21 chr10:5669400-5671000 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr10:5669400-5674200 Weak transcription Spleen Spleen
23 chr10:5669600-5671000 Flanking Active TSS HepG2 liver
24 chr10:5669600-5672200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr10:5669800-5671000 Enhancers Aorta Aorta
26 chr10:5669800-5671600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr10:5669800-5671600 Enhancers Fetal Intestine Small intestine
28 chr10:5670000-5671600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr10:5670200-5671000 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr10:5670200-5671000 Flanking Active TSS Duodenum Mucosa Duodenum
31 chr10:5670200-5671000 Flanking Active TSS HSMM muscle
32 chr10:5670200-5671000 Flanking Active TSS HSMMtube muscle
33 chr10:5670200-5671000 Active TSS NHDF-Ad bronchial
34 chr10:5670200-5671000 Active TSS Osteobl bone
35 chr10:5670200-5671400 Flanking Active TSS Muscle Satellite Cultured Cells --
36 chr10:5670200-5671400 Flanking Active TSS Adipose Nuclei Adipose
37 chr10:5670200-5671400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
38 chr10:5670200-5671400 Flanking Active TSS NHLF lung
39 chr10:5670200-5672000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr10:5670200-5672400 Enhancers Fetal Stomach stomach
41 chr10:5670200-5681400 Enhancers Fetal Thymus thymus
42 chr10:5670400-5671000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr10:5670400-5671000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr10:5670400-5671000 Active TSS Duodenum Smooth Muscle Duodenum
45 chr10:5670400-5671000 Flanking Active TSS Fetal Muscle Trunk muscle
46 chr10:5670400-5671000 Active TSS Psoas Muscle Psoas
47 chr10:5670400-5671000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
48 chr10:5670400-5671200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr10:5670400-5671400 Bivalent Enhancer Primary T cells fromperipheralblood blood
50 chr10:5670400-5671400 Enhancers Primary hematopoietic stem cells blood

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