Variant report

Variant rs1317516
Chromosome Location chr10:5672720-5672721
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5658000-5673600 Weak transcription Left Ventricle heart
2 chr10:5665200-5681800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr10:5665400-5673800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr10:5665400-5680400 Weak transcription Brain Hippocampus Middle brain
5 chr10:5665400-5680600 Weak transcription Fetal Brain Female brain
6 chr10:5665600-5673400 Weak transcription HMEC breast
7 chr10:5665600-5680400 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr10:5665600-5680400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr10:5665600-5680400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr10:5665600-5681800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr10:5665600-5698600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr10:5667200-5674200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr10:5668800-5680400 Weak transcription Gastric stomach
14 chr10:5669000-5676400 Enhancers Pancreas Pancrea
15 chr10:5669400-5674200 Weak transcription Spleen Spleen
16 chr10:5670200-5681400 Enhancers Fetal Thymus thymus
17 chr10:5670400-5672800 Weak transcription Fetal Intestine Large intestine
18 chr10:5670400-5673000 Enhancers Small Intestine intestine
19 chr10:5670600-5672800 Enhancers Stomach Mucosa stomach
20 chr10:5670800-5672800 Weak transcription Esophagus oesophagus
21 chr10:5670800-5674000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr10:5671000-5673400 Weak transcription Colonic Mucosa Colon
23 chr10:5671000-5673800 Weak transcription Fetal Muscle Trunk muscle
24 chr10:5671000-5674000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr10:5671000-5674000 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr10:5671000-5674200 Weak transcription Aorta Aorta
27 chr10:5671000-5674400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr10:5671000-5680400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr10:5671000-5680800 Weak transcription Psoas Muscle Psoas
30 chr10:5671000-5681000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr10:5671200-5674000 Weak transcription Fetal Kidney kidney
32 chr10:5671200-5674200 Weak transcription Fetal Lung lung
33 chr10:5671200-5679800 Weak transcription Brain Anterior Caudate brain
34 chr10:5671200-5680400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr10:5671400-5673600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr10:5671400-5673800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr10:5671400-5674200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr10:5671400-5680400 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr10:5671400-5680400 Weak transcription Adipose Nuclei Adipose
40 chr10:5671400-5680800 Weak transcription Primary hematopoietic stem cells blood
41 chr10:5671400-5680800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr10:5671400-5681400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr10:5671400-5683800 Weak transcription HUVEC blood vessel
44 chr10:5671600-5673000 Weak transcription Fetal Intestine Small intestine
45 chr10:5671600-5673400 Weak transcription Liver Liver
46 chr10:5671600-5673400 Weak transcription A549 lung
47 chr10:5671600-5673600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr10:5671600-5674200 Weak transcription NHDF-Ad bronchial
49 chr10:5671600-5674600 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr10:5671600-5679800 Weak transcription Ovary ovary

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