Variant report

Variant rs1132293
Chromosome Location chr10:5681038-5681039
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5665200-5681800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:5665600-5681800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr10:5665600-5698600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr10:5670200-5681400 Enhancers Fetal Thymus thymus
5 chr10:5671400-5681400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr10:5671400-5683800 Weak transcription HUVEC blood vessel
7 chr10:5671600-5681600 Weak transcription Osteobl bone
8 chr10:5671600-5689000 Weak transcription Hela-S3 cervix
9 chr10:5672000-5681800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr10:5672000-5682800 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr10:5672000-5683600 Weak transcription Colon Smooth Muscle Colon
12 chr10:5672000-5701600 Weak transcription NH-A brain
13 chr10:5672400-5682400 Weak transcription Primary T cells fromperipheralblood blood
14 chr10:5672400-5698600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr10:5672600-5681200 Weak transcription Primary T cells from cord blood blood
16 chr10:5672600-5686600 Weak transcription Primary B cells from peripheral blood blood
17 chr10:5674200-5682000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr10:5674400-5681200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr10:5674400-5685800 Weak transcription Right Atrium heart
20 chr10:5674600-5681200 Weak transcription NHEK skin
21 chr10:5674600-5688600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr10:5674800-5682000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr10:5674800-5696200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr10:5675000-5681400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr10:5675000-5682400 Weak transcription HMEC breast
26 chr10:5675000-5683600 Weak transcription A549 lung
27 chr10:5675200-5685200 Weak transcription Fetal Kidney kidney
28 chr10:5675600-5682000 Weak transcription Placenta Amnion Placenta Amnion
29 chr10:5676000-5681600 Weak transcription HepG2 liver
30 chr10:5676600-5682400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr10:5677000-5681200 Enhancers Thymus Thymus
32 chr10:5677200-5682200 Weak transcription Primary B cells from cord blood blood
33 chr10:5677600-5705600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr10:5678200-5681200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr10:5679000-5681600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr10:5679400-5685200 Weak transcription Fetal Brain Male brain
37 chr10:5679400-5690600 Weak transcription Muscle Satellite Cultured Cells --
38 chr10:5679400-5698600 Weak transcription K562 blood
39 chr10:5679600-5681200 Weak transcription H9 Cell Line embryonic stem cell
40 chr10:5679800-5684200 Strong transcription Brain Anterior Caudate brain
41 chr10:5679800-5684400 Strong transcription Ovary ovary
42 chr10:5679800-5686600 Strong transcription Fetal Intestine Small intestine
43 chr10:5679800-5694200 Weak transcription HSMMtube muscle
44 chr10:5679800-5695400 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr10:5680200-5684600 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr10:5680200-5684600 Strong transcription Fetal Stomach stomach
47 chr10:5680400-5681400 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr10:5680400-5682000 Strong transcription Fetal Muscle Trunk muscle
49 chr10:5680400-5682000 Strong transcription Lung lung
50 chr10:5680400-5682200 Strong transcription Sigmoid Colon Sigmoid Colon

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