Variant report

Variant rs1317517
Chromosome Location chr10:5672580-5672581
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5658000-5673600 Weak transcription Left Ventricle heart
2 chr10:5665200-5681800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr10:5665400-5672600 Weak transcription Lung lung
4 chr10:5665400-5673800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:5665400-5680400 Weak transcription Brain Hippocampus Middle brain
6 chr10:5665400-5680600 Weak transcription Fetal Brain Female brain
7 chr10:5665600-5673400 Weak transcription HMEC breast
8 chr10:5665600-5680400 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr10:5665600-5680400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr10:5665600-5680400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr10:5665600-5681800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr10:5665600-5698600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr10:5667200-5674200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr10:5668800-5680400 Weak transcription Gastric stomach
15 chr10:5669000-5676400 Enhancers Pancreas Pancrea
16 chr10:5669400-5674200 Weak transcription Spleen Spleen
17 chr10:5670200-5681400 Enhancers Fetal Thymus thymus
18 chr10:5670400-5672800 Weak transcription Fetal Intestine Large intestine
19 chr10:5670400-5673000 Enhancers Small Intestine intestine
20 chr10:5670600-5672600 Enhancers Primary T cells from cord blood blood
21 chr10:5670600-5672600 Enhancers Thymus Thymus
22 chr10:5670600-5672800 Enhancers Stomach Mucosa stomach
23 chr10:5670800-5672800 Weak transcription Esophagus oesophagus
24 chr10:5670800-5674000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr10:5671000-5672600 Enhancers Duodenum Smooth Muscle Duodenum
26 chr10:5671000-5672600 Enhancers HepG2 liver
27 chr10:5671000-5673400 Weak transcription Colonic Mucosa Colon
28 chr10:5671000-5673800 Weak transcription Fetal Muscle Trunk muscle
29 chr10:5671000-5674000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr10:5671000-5674000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr10:5671000-5674200 Weak transcription Aorta Aorta
32 chr10:5671000-5674400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr10:5671000-5680400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr10:5671000-5680800 Weak transcription Psoas Muscle Psoas
35 chr10:5671000-5681000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr10:5671200-5674000 Weak transcription Fetal Kidney kidney
37 chr10:5671200-5674200 Weak transcription Fetal Lung lung
38 chr10:5671200-5679800 Weak transcription Brain Anterior Caudate brain
39 chr10:5671200-5680400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr10:5671400-5673600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:5671400-5673800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr10:5671400-5674200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr10:5671400-5680400 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr10:5671400-5680400 Weak transcription Adipose Nuclei Adipose
45 chr10:5671400-5680800 Weak transcription Primary hematopoietic stem cells blood
46 chr10:5671400-5680800 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr10:5671400-5681400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr10:5671400-5683800 Weak transcription HUVEC blood vessel
49 chr10:5671600-5672600 Enhancers Primary B cells from peripheral blood blood
50 chr10:5671600-5673000 Weak transcription Fetal Intestine Small intestine

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