Variant report

Variant	rs1148301
Chromosome Location	chr10:23234144-23234145
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1060761	0.83[CHB][hapmap];0.83[CHD][hapmap];0.86[JPT][hapmap]
rs10764366	0.91[CEU][hapmap];0.92[TSI][hapmap]
rs10764367	0.91[CEU][hapmap];0.92[TSI][hapmap]
rs10828377	0.87[CEU][hapmap]
rs10828378	0.87[CEU][hapmap]
rs10828379	0.87[CEU][hapmap];0.95[TSI][hapmap]
rs10828380	0.87[CEU][hapmap]
rs10828382	0.92[TSI][hapmap]
rs1171136	0.91[CHB][hapmap]
rs1171138	0.91[CHB][hapmap]
rs2448132	0.91[CHB][hapmap]
rs2927925	0.81[JPT][hapmap]
rs2995679	0.86[CEU][hapmap]
rs3101795	0.81[JPT][hapmap]
rs3101796	0.91[CHB][hapmap]
rs3109068	0.91[CHB][hapmap]
rs9665603	0.91[CEU][hapmap];0.92[TSI][hapmap]
rs9732427	0.82[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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