Variant report

Variant	rs1148302
Chromosome Location	chr10:23269182-23269183
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10741013	0.86[CHB][hapmap];0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs10741014	0.84[JPT][hapmap]
rs10764370	0.83[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs10764372	0.84[JPT][hapmap]
rs10828391	0.89[ASN][1000 genomes]
rs10828393	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs1170665	0.95[CHB][hapmap];0.84[JPT][hapmap];0.89[ASN][1000 genomes]
rs1300432	0.94[ASN][1000 genomes]
rs2927924	0.91[CHB][hapmap];0.90[JPT][hapmap];0.90[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4747451	0.85[JPT][hapmap]
rs4748831	0.80[ASN][1000 genomes]
rs4748832	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs7070539	0.89[JPT][hapmap]
rs7080677	0.85[JPT][hapmap]
rs7909174	0.82[ASN][1000 genomes]
rs7914172	0.89[JPT][hapmap]
rs7917324	0.90[JPT][hapmap]
rs993352	0.84[JPT][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23265000-23277600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr10:23267200-23269800	Weak transcription	Brain Anterior Caudate	brain
3	chr10:23268000-23270200	Weak transcription	Brain Angular Gyrus	brain
4	chr10:23268000-23270400	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr10:23268000-23274200	Weak transcription	Brain Hippocampus Middle	brain
6	chr10:23268200-23270200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr10:23268200-23270200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr10:23268200-23270600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr10:23268200-23272600	Weak transcription	Brain Substantia Nigra	brain
10	chr10:23268200-23277800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr10:23268600-23270200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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