Variant report

Variant	rs10741013
Chromosome Location	chr10:23283229-23283230
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23281631..23284076-chr10:23292100..23294027,2	K562	blood:
2	chr10:23281876..23284605-chr10:23287991..23291315,3	K562	blood:
3	chr10:23282511..23285269-chr10:23340360..23342664,2	K562	blood:
4	chr10:23276400..23278093-chr10:23282051..23283744,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10082382	0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10741014	0.86[CHB][hapmap];0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs10764370	1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10764372	1.00[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];0.84[JPT][hapmap];0.91[MEX][hapmap];0.81[ASN][1000 genomes]
rs10828391	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10828393	1.00[CHB][hapmap];0.93[CHD][hapmap];0.80[GIH][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs1148302	0.86[CHB][hapmap];0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs1170665	0.82[CHB][hapmap];0.90[CHD][hapmap];0.84[JPT][hapmap];0.82[MEX][hapmap];0.83[ASN][1000 genomes]
rs1300432	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2927924	0.89[JPT][hapmap]
rs4747451	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs4748831	0.95[CHB][hapmap];0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4748832	1.00[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4748835	0.91[CHB][hapmap];0.87[CHD][hapmap];0.90[JPT][hapmap]
rs7070539	0.86[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs7075999	0.82[ASN][1000 genomes]
rs7079729	0.82[ASN][1000 genomes]
rs7080677	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs7898352	0.82[MEX][hapmap]
rs7909174	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7914172	0.86[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap]
rs7917324	0.86[CHB][hapmap];0.89[JPT][hapmap]
rs993352	0.84[JPT][hapmap];0.95[MEX][hapmap];0.82[TSI][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10741013	C10orf67	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23282800-23294200	Weak transcription	Pancreas	Pancrea

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