Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:23303236..23310250-chr10:23341340..23346193,13	K562	blood:
2	chr10:23302995..23309769-chr10:23341340..23346193,8	K562	blood:
3	chr10:23284883..23286665-chr10:23302746..23304399,2	K562	blood:

Variant related genes	Relation type
ENSG00000223131	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10082382	0.81[ASN][1000 genomes]
rs10741013	0.86[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs10741014	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10764370	0.87[CHB][hapmap];0.81[JPT][hapmap];0.80[ASN][1000 genomes]
rs10764371	0.83[CHB][hapmap]
rs10764372	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10828393	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs1148302	0.85[JPT][hapmap]
rs11814683	0.83[CHB][hapmap]
rs2927924	1.00[CEU][hapmap]
rs4747451	1.00[CEU][hapmap];0.96[CHB][hapmap];0.91[JPT][hapmap]
rs4748831	0.82[CHB][hapmap];0.82[ASN][1000 genomes]
rs4748832	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs4748835	1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap]
rs7070539	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7074488	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7075999	0.99[ASN][1000 genomes]
rs7079729	0.99[ASN][1000 genomes]
rs7909174	0.82[ASN][1000 genomes]
rs7914172	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs7917324	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs899376	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs993352	0.83[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975810	chr10:23302287-23306366	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23301400-23311200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:23304000-23304600	Flanking Active TSS	GM12878-XiMat	blood
3	chr10:23304000-23305400	Enhancers	K562	blood

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