The 2.0 version of rSNPBase

Variant report

Variant rs11582699
Chromosome Location chr1:161941710-161941711
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161902800-161943400 Weak transcription Esophagus oesophagus
2 chr1:161904800-161956600 Weak transcription Fetal Brain Male brain
3 chr1:161926200-161942200 Weak transcription Right Ventricle heart
4 chr1:161927000-161944000 Weak transcription Colonic Mucosa Colon
5 chr1:161928400-161941800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:161929000-161943800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:161929200-161944000 Weak transcription Ovary ovary
8 chr1:161931000-161943200 Weak transcription Placenta Placenta
9 chr1:161931200-161942400 Weak transcription Spleen Spleen
10 chr1:161931200-161943400 Weak transcription Psoas Muscle Psoas
11 chr1:161931400-161943400 Weak transcription K562 blood
12 chr1:161931800-161942800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:161932400-161942200 Weak transcription Colon Smooth Muscle Colon
14 chr1:161932400-161955400 Weak transcription Brain Substantia Nigra brain
15 chr1:161932600-161943200 Weak transcription Adipose Nuclei Adipose
16 chr1:161932600-161943200 Weak transcription Right Atrium heart
17 chr1:161932600-161943800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:161932800-161943200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:161932800-161944000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:161933400-161941800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:161933600-161942000 Weak transcription Rectal Smooth Muscle rectum
22 chr1:161933600-161953400 Weak transcription HSMMtube muscle
23 chr1:161937000-161942800 Weak transcription Left Ventricle heart
24 chr1:161937400-161941800 Weak transcription Stomach Smooth Muscle stomach
25 chr1:161937400-161944000 Weak transcription Duodenum Mucosa Duodenum
26 chr1:161937600-161941800 Weak transcription Fetal Stomach stomach
27 chr1:161937600-161954800 Weak transcription Primary hematopoietic stem cells blood
28 chr1:161938000-161942000 Weak transcription Primary T cells from cord blood blood
29 chr1:161938000-161942800 Weak transcription Gastric stomach
30 chr1:161938000-161944000 Weak transcription Liver Liver
31 chr1:161938000-161944000 Weak transcription Pancreas Pancrea
32 chr1:161939000-161943000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:161939200-161942000 Enhancers Fetal Muscle Trunk muscle
34 chr1:161939200-161946000 Enhancers Fetal Muscle Leg muscle
35 chr1:161939200-161956600 Weak transcription Fetal Intestine Small intestine
36 chr1:161940400-161942400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:161940600-161942200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr1:161940600-161944000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:161940800-161942000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:161940800-161942000 Weak transcription Lung lung
41 chr1:161940800-161944000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:161940800-161944000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:161940800-161952200 Weak transcription Aorta Aorta
44 chr1:161941200-161942600 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015