Variant report
| Variant | rs12043145 |
|---|---|
| Chromosome Location | chr1:161897797-161897798 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:161824200-161928400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr1:161861600-161906400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr1:161861600-161936000 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr1:161881600-161898800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 5 | chr1:161881600-161912000 | Weak transcription | Aorta | Aorta |
| 6 | chr1:161883000-161898600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 7 | chr1:161883200-161916000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr1:161883400-161928200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 9 | chr1:161884200-161910800 | Weak transcription | HepG2 | liver |
| 10 | chr1:161884600-161927600 | Weak transcription | NHEK | skin |
| 11 | chr1:161884800-161922600 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr1:161885000-161910600 | Weak transcription | Gastric | stomach |
| 13 | chr1:161885000-161914400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr1:161885000-161928000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr1:161885200-161903600 | Weak transcription | Thymus | Thymus |
| 16 | chr1:161885200-161911800 | Weak transcription | Left Ventricle | heart |
| 17 | chr1:161885400-161903600 | Weak transcription | Fetal Thymus | thymus |
| 18 | chr1:161885400-161906200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr1:161885600-161899000 | Weak transcription | Ovary | ovary |
| 20 | chr1:161885600-161905000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 21 | chr1:161885800-161919200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr1:161886000-161905800 | Weak transcription | Adipose Nuclei | Adipose |
| 23 | chr1:161886000-161910600 | Weak transcription | K562 | blood |
| 24 | chr1:161886000-161911600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 25 | chr1:161886000-161911800 | Weak transcription | Placenta | Placenta |
| 26 | chr1:161886000-161912000 | Weak transcription | Lung | lung |
| 27 | chr1:161886000-161912000 | Weak transcription | Pancreas | Pancrea |
| 28 | chr1:161886200-161912000 | Weak transcription | Fetal Intestine Large | intestine |
| 29 | chr1:161887000-161918600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr1:161887000-161928200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 31 | chr1:161887200-161903400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 32 | chr1:161887200-161906600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr1:161887200-161914200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 34 | chr1:161887200-161915600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 35 | chr1:161887200-161929600 | Weak transcription | Hela-S3 | cervix |
| 36 | chr1:161888600-161900800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr1:161888800-161902400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 38 | chr1:161889200-161898600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 39 | chr1:161889800-161903400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 40 | chr1:161890000-161902600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 41 | chr1:161890000-161902600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 42 | chr1:161890200-161899800 | Strong transcription | Primary B cells from cord blood | blood |
| 43 | chr1:161890600-161901600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 44 | chr1:161890600-161902600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr1:161891000-161899000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr1:161891000-161902400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 47 | chr1:161891000-161912800 | Weak transcription | Fetal Muscle Leg | muscle |
| 48 | chr1:161891000-161915600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 49 | chr1:161891400-161903400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 50 | chr1:161891400-161906400 | Weak transcription | Brain Hippocampus Middle | brain |
