The 2.0 version of rSNPBase

Variant report

Variant rs2271013
Chromosome Location chr1:161753802-161753803
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
2 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:161737000-161765600 Weak transcription Aorta Aorta
4 chr1:161737200-161761600 Weak transcription Fetal Brain Male brain
5 chr1:161737200-161761600 Weak transcription Right Ventricle heart
6 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
7 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
8 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
9 chr1:161737600-161762000 Weak transcription Fetal Lung lung
10 chr1:161737600-161764600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:161738200-161760200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:161738400-161754000 Weak transcription Fetal Brain Female brain
13 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
14 chr1:161738600-161795600 Weak transcription Gastric stomach
15 chr1:161740400-161761800 Weak transcription Ovary ovary
16 chr1:161742000-161754000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:161742400-161773000 Weak transcription Small Intestine intestine
18 chr1:161745400-161780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:161747200-161761600 Weak transcription Thymus Thymus
20 chr1:161747200-161763000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:161747600-161773800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:161748000-161778800 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:161748200-161758400 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:161748200-161780000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:161748800-161758400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr1:161749000-161754000 Weak transcription Fetal Kidney kidney
27 chr1:161749000-161761600 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:161749000-161777000 Strong transcription Liver Liver
29 chr1:161749200-161780000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr1:161749400-161760800 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr1:161750000-161762000 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:161750000-161768200 Strong transcription Primary T helper cells PMA-I stimulated --
33 chr1:161750400-161755600 Strong transcription Fetal Muscle Trunk muscle
34 chr1:161750400-161757400 Strong transcription Primary T cells fromperipheralblood blood
35 chr1:161750400-161757800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:161750400-161758800 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr1:161750600-161758400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:161750600-161774800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:161750800-161757200 Weak transcription Brain Germinal Matrix brain
40 chr1:161750800-161760000 Strong transcription Hela-S3 cervix
41 chr1:161751200-161758000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr1:161751200-161758000 Strong transcription Placenta Placenta
43 chr1:161751200-161758200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:161751200-161758800 Strong transcription Primary B cells from peripheral blood blood
45 chr1:161751400-161755400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:161751400-161757600 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr1:161751400-161758000 Strong transcription HUVEC blood vessel
48 chr1:161751600-161755400 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:161751600-161758000 Strong transcription Primary T cells from cord blood blood
50 chr1:161751800-161755000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015