The 2.0 version of rSNPBase

Variant report

Variant rs3738326
Chromosome Location chr1:161772242-161772243
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161737200-161775200 Weak transcription Fetal Stomach stomach
2 chr1:161737200-161775800 Weak transcription Stomach Mucosa stomach
3 chr1:161737200-161780000 Weak transcription Fetal Intestine Small intestine
4 chr1:161738600-161794000 Weak transcription Pancreas Pancrea
5 chr1:161738600-161795600 Weak transcription Gastric stomach
6 chr1:161742400-161773000 Weak transcription Small Intestine intestine
7 chr1:161745400-161780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:161747600-161773800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:161748000-161778800 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr1:161748200-161780000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:161749000-161777000 Strong transcription Liver Liver
12 chr1:161749200-161780000 Strong transcription Primary monocytes fromperipheralblood blood
13 chr1:161750600-161774800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:161751800-161773800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:161752200-161773400 Strong transcription Rectal Mucosa Donor 31 rectum
16 chr1:161752200-161780000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:161752600-161776000 Weak transcription Fetal Heart heart
18 chr1:161753200-161780000 Weak transcription Esophagus oesophagus
19 chr1:161753400-161800600 Weak transcription Spleen Spleen
20 chr1:161755000-161793600 Weak transcription Colonic Mucosa Colon
21 chr1:161755400-161780000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:161756200-161776800 Strong transcription Primary B cells from cord blood blood
23 chr1:161757400-161778400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:161757400-161797000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:161759200-161773600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:161759200-161773800 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr1:161759400-161773400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:161759600-161773200 Strong transcription Adipose Nuclei Adipose
29 chr1:161759600-161773800 Strong transcription Primary T cells from cord blood blood
30 chr1:161759600-161777400 Strong transcription Primary T cells fromperipheralblood blood
31 chr1:161760200-161773600 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:161760400-161772600 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr1:161760400-161780200 Weak transcription A549 lung
34 chr1:161760800-161777200 Strong transcription Primary B cells from peripheral blood blood
35 chr1:161761200-161773400 Strong transcription Fetal Thymus thymus
36 chr1:161761200-161774400 Strong transcription Primary hematopoietic stem cells blood
37 chr1:161761200-161774600 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr1:161762200-161776000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:161762200-161779800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:161762200-161780000 Weak transcription Thymus Thymus
41 chr1:161762200-161790600 Weak transcription Fetal Brain Male brain
42 chr1:161762400-161779800 Weak transcription Brain Cingulate Gyrus brain
43 chr1:161762400-161790800 Weak transcription NH-A brain
44 chr1:161762400-161791200 Weak transcription Right Ventricle heart
45 chr1:161762400-161795400 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr1:161762800-161797600 Weak transcription HMEC breast
47 chr1:161763000-161797400 Weak transcription NHLF lung
48 chr1:161763400-161779800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:161763400-161780000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:161763800-161772400 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015