The 2.0 version of rSNPBase

Variant report

Variant rs56371448
Chromosome Location chr1:161737706-161737707
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161736400-161738200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr1:161736600-161737800 Weak transcription Spleen Spleen
3 chr1:161736600-161738600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr1:161736800-161737800 Weak transcription Gastric stomach
5 chr1:161736800-161737800 Flanking Active TSS Hela-S3 cervix
6 chr1:161736800-161738600 Flanking Active TSS Liver Liver
7 chr1:161736800-161738600 Flanking Active TSS Dnd41 blood
8 chr1:161736800-161740000 Enhancers Small Intestine intestine
9 chr1:161736800-161752000 Weak transcription Lung lung
10 chr1:161736800-161754000 Weak transcription Colonic Mucosa Colon
11 chr1:161736800-161757200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:161737000-161737800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:161737000-161737800 Enhancers Fetal Thymus thymus
14 chr1:161737000-161738000 Weak transcription Ovary ovary
15 chr1:161737000-161738200 Enhancers Rectal Smooth Muscle rectum
16 chr1:161737000-161738400 Enhancers Primary B cells from peripheral blood blood
17 chr1:161737000-161738600 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:161737000-161738600 Enhancers Primary T cells fromperipheralblood blood
19 chr1:161737000-161738600 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr1:161737000-161738600 Enhancers Primary mononuclear cells fromperipheralblood Blood
21 chr1:161737000-161740200 Enhancers Colon Smooth Muscle Colon
22 chr1:161737000-161740600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr1:161737000-161741000 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr1:161737000-161743800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:161737000-161745400 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr1:161737000-161751600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:161737000-161752000 Weak transcription Left Ventricle heart
28 chr1:161737000-161765600 Weak transcription Aorta Aorta
29 chr1:161737200-161737800 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr1:161737200-161737800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:161737200-161737800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:161737200-161737800 Enhancers Brain Germinal Matrix brain
33 chr1:161737200-161737800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:161737200-161738000 Weak transcription Pancreas Pancrea
35 chr1:161737200-161738000 Weak transcription Right Atrium heart
36 chr1:161737200-161738200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:161737200-161738200 Enhancers Rectal Mucosa Donor 29 rectum
38 chr1:161737200-161738200 Enhancers Thymus Thymus
39 chr1:161737200-161738400 Enhancers Fetal Brain Female brain
40 chr1:161737200-161738600 Enhancers Stomach Smooth Muscle stomach
41 chr1:161737200-161739000 Weak transcription NH-A brain
42 chr1:161737200-161740800 Enhancers Primary T cells from cord blood blood
43 chr1:161737200-161741400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:161737200-161741600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr1:161737200-161744000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:161737200-161745000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr1:161737200-161746600 Weak transcription NHLF lung
48 chr1:161737200-161748000 Enhancers Primary T helper naive cells from peripheral blood blood
49 chr1:161737200-161751200 Weak transcription Placenta Placenta
50 chr1:161737200-161751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015